PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027349131.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 448aa MW: 50008.8 Da PI: 6.6915

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027349131.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.8	4.4e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ + ++G g+W+++++ g+ R++k+c++rw +yl XP_027349131.1 14 KGLWSPEEDEKLLKHISKYGHGCWSSVPKQAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	46	1.2e-14	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +++eE+ +++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ XP_027349131.1 67 RGTFSQEEENIIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 899*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLLKHIS KYGHGCWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQEEENIIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG 120 IDPVTHKPLS EVENGEEDKT RSQEKVPELS NELNLLNSES FKSDEASYEH RTSPIAPKGY 180 ATEMEGSSSS KINSKNDPNL ITNCSNKDLF LDRFMTSHQE SYTTSCQPSD LMGNYPLQMS 240 YASSTDTLPT NSNSCHWFSQ TARPFDMNSE FTSNVMSILP PTATSFLNSS SFCYKPSLAV 300 PSEDISISTA SFALNGSNYW EASASNNSNS SNTSDGSREL TSSSPLNVKN SVLSSWGMTD 360 CSTSTKEAQI SLMENQTEEA KWSEYLHNPM LMLAAPESLC NQIKPATHLV PDHALGAMLP 420 HSKEQEQSQT SSIFSKDIQK LTAAFGHI

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLLKHIS KYGHGCWSSV PKQAGLQRCG KSCRLRWINY  60
LRPDLKRGTF SQEEENIIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG  120
IDPVTHKPLS EVENGEEDKT RSQEKVPELS NELNLLNSES FKSDEASYEH RTSPIAPKGY  180
ATEMEGSSSS KINSKNDPNL ITNCSNKDLF LDRFMTSHQE SYTTSCQPSD LMGNYPLQMS  240
YASSTDTLPT NSNSCHWFSQ TARPFDMNSE FTSNVMSILP PTATSFLNSS SFCYKPSLAV  300
PSEDISISTA SFALNGSNYW EASASNNSNS SNTSDGSREL TSSSPLNVKN SVLSSWGMTD  360
CSTSTKEAQI SLMENQTEEA KWSEYLHNPM LMLAAPESLC NQIKPATHLV PDHALGAMLP  420
HSKEQEQSQT SSIFSKDIQK LTAAFGHI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	118	LKKKLRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01680.3	7e-96	MYB family protein