PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027349418.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 400aa MW: 45242.9 Da PI: 4.534

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027349418.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.1	3.1e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEde+l ++++ G g+W++ ++ g+ R++k+c++rw +yl XP_027349418.1 14 KGRWTAEEDEILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	50	6.8e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eE+ ++ ++++ lG++ W++Ia++++ gRt++++k++w+++l XP_027349418.1 67 RGNISVEEENIIMKLHASLGNR-WSLIASHLP-GRTDNEIKNYWNSHL 112 78999***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MGRAPCCAKV GLKKGRWTAE EDEILTKYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRADLKRGNI SVEEENIIMK LHASLGNRWS LIASHLPGRT DNEIKNYWNS HLSRKIYSSR 120 GTSNKEIITL PPKRKGGRTS RWAMKRSKTY AQKSTNLLER PKPSDTDHIH NNTEAIPLPP 180 TPTLESENLS STIMDLMVLD EHEREELGDG PSTSAHDHQE STIQEENEGT VLLQCLNGEK 240 NGNLTLGPHD EDIIIINDGE VWNFNDILDT SCVLEASGEL TCINDDNEVV DVMGNERGDT 300 CNDKMGSSEE ERESSGNHST NGELHSCASM ASGLDDCNWD WERVMQTDHK DESVLWEHSE 360 DLLSWLWEDQ DWEKDFQNFG EIGPEEQNAF VSWFLSEADV

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MGRAPCCAKV GLKKGRWTAE EDEILTKYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRADLKRGNI SVEEENIIMK LHASLGNRWS LIASHLPGRT DNEIKNYWNS HLSRKIYSSR  120
GTSNKEIITL PPKRKGGRTS RWAMKRSKTY AQKSTNLLER PKPSDTDHIH NNTEAIPLPP  180
TPTLESENLS STIMDLMVLD EHEREELGDG PSTSAHDHQE STIQEENEGT VLLQCLNGEK  240
NGNLTLGPHD EDIIIINDGE VWNFNDILDT SCVLEASGEL TCINDDNEVV DVMGNERGDT  300
CNDKMGSSEE ERESSGNHST NGELHSCASM ASGLDDCNWD WERVMQTDHK DESVLWEHSE  360
DLLSWLWEDQ DWEKDFQNFG EIGPEEQNAF VSWFLSEADV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49330.1	1e-73	MYB family protein