PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027349441.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 223aa MW: 25472.5 Da PI: 9.8151

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027349441.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.3	1.5e-17	27	74	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ eEd +l ++v+ +G g+W+++ar g++R++k+c++rw++yl XP_027349441.1 27 KGPWSIEEDTILTNYVATHGDGRWNSVARSSGLKRSGKSCRLRWLNYL 74 79********************************************97 PP
2	Myb_DNA-binding	48.2	2.4e-15	80	123	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E+ ++d++ ++G++ W++Ia++++ gRt++++k++w++ XP_027349441.1 80 RGNITLQEQITILDLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 123 7899****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MDYAKVKKGG SIEQVQQSGE DETSIRKGPW SIEEDTILTN YVATHGDGRW NSVARSSGLK 60 RSGKSCRLRW LNYLRPDVRR GNITLQEQIT ILDLHSRWGN RWSKIAQHLP GRTDNEIKNY 120 WRTRVIKQAK QLKCDVDSKQ FKDALRYVWL PRLIERIQPP SQTHPSPRVH GSESSGSGTE 180 WVKQSSSGVE VDHNTSLNAF GGGGGGEIME NLWEDENIWF NIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47190.1	5e-78	MYB family protein