PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350088.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 359aa MW: 38562.9 Da PI: 8.9482

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350088.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	138.4	2e-43	70	146	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +CqvegC++dls+ak y++rhkvC +hsk+p+v+v+gl+qrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+ XP_027350088.1 70 RCQVEGCKVDLSDAKAYYSRHKVCGMHSKSPTVIVAGLQQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPP 146 6**************************************************************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MGSDSATKTP SSPPNSSSES LNGLKFGQKI YFEDVGLATP ATSVAASSSS SSSSSKKGRG 60 GSLQPAQPPR CQVEGCKVDL SDAKAYYSRH KVCGMHSKSP TVIVAGLQQR FCQQCSRFHQ 120 LPEFDQGKRS CRRRLAGHNE RRRKPPPSSL LTSRYGRISS SVFDNSGRGG NFLMELSSYP 180 KLSLRNSLPT PRSSELVPGN QTTTLNWQGN SETPPDLFLH GSVGGTSFPG PGHPPGESYT 240 GVTDSSCALS LLSNQTWVSR NAAPSLGLSN MINFNGTPMT QLAAASHGAA IHQLPNTSWC 300 FKGIDPDNCS HEVVPDLGLG QISQPLNSQL PGELDLAQGR RHYMDLEQSR AYESPHWSL

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MGSDSATKTP SSPPNSSSES LNGLKFGQKI YFEDVGLATP ATSVAASSSS SSSSSKKGRG  60
GSLQPAQPPR CQVEGCKVDL SDAKAYYSRH KVCGMHSKSP TVIVAGLQQR FCQQCSRFHQ  120
LPEFDQGKRS CRRRLAGHNE RRRKPPPSSL LTSRYGRISS SVFDNSGRGG NFLMELSSYP  180
KLSLRNSLPT PRSSELVPGN QTTTLNWQGN SETPPDLFLH GSVGGTSFPG PGHPPGESYT  240
GVTDSSCALS LLSNQTWVSR NAAPSLGLSN MINFNGTPMT QLAAASHGAA IHQLPNTSWC  300
FKGIDPDNCS HEVVPDLGLG QISQPLNSQL PGELDLAQGR RHYMDLEQSR AYESPHWSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	4e-72	SBP family protein