PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350389.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HSF

Protein Properties

Length: 375aa MW: 43585.6 Da PI: 5.0289

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350389.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	108	7.1e-34	52	143	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+++ +ed+++++++sws++g sfvv+d++ f++++Lp+yFkh+nf+SFvRQLn+YgF+k++ ++ weF+++ F +g+++ll + XP_027350389.1 52 FLTKTFDAVEDPTTSHIVSWSRSGISFVVWDPHAFSRDLLPRYFKHNNFSSFVRQLNTYGFRKIDPDR---------WEFANEGFLRGQRHLLGN 137 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k+ XP_027350389.1 138 IRRRKQ 143 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MNYLYPVKEE YLESPPPQPS SSSTSYTDGD EESMVSLPRP MEGLHDIGPP PFLTKTFDAV 60 EDPTTSHIVS WSRSGISFVV WDPHAFSRDL LPRYFKHNNF SSFVRQLNTY GFRKIDPDRW 120 EFANEGFLRG QRHLLGNIRR RKQPSQPSTS QQAQGHCVEV GRFGLDEEVD RLRRDKQVLM 180 VELVRLRQQQ QNTRSYLEAM EERLRGTEIK QQQMMAFLAR ALKNPIFIQQ LLQQKDKRRE 240 LEEAMSKKRR RPIEQGPRGV GESSSGGERR NSVKAEPLVF GEYGFEVSEL EALAMEMQGF 300 RRGRREQEEE NEELESQERL EKELDEGFWE ELFSESFEGE LDIPTSQGDD EDVNVLANRL 360 GYLGSSPKRN QDKPF

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MNYLYPVKEE YLESPPPQPS SSSTSYTDGD EESMVSLPRP MEGLHDIGPP PFLTKTFDAV  60
EDPTTSHIVS WSRSGISFVV WDPHAFSRDL LPRYFKHNNF SSFVRQLNTY GFRKIDPDRW  120
EFANEGFLRG QRHLLGNIRR RKQPSQPSTS QQAQGHCVEV GRFGLDEEVD RLRRDKQVLM  180
VELVRLRQQQ QNTRSYLEAM EERLRGTEIK QQQMMAFLAR ALKNPIFIQQ LLQQKDKRRE  240
LEEAMSKKRR RPIEQGPRGV GESSSGGERR NSVKAEPLVF GEYGFEVSEL EALAMEMQGF  300
RRGRREQEEE NEELESQERL EKELDEGFWE ELFSESFEGE LDIPTSQGDD EDVNVLANRL  360
GYLGSSPKRN QDKPF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	237	251	KRRELEEAMSKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-113	HSF family protein