PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350393.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 306aa MW: 32794.3 Da PI: 6.3736

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350393.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.2	8e-10	145	189	5	54
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 h+++Er RR+ri +++ L+el+P+ + K + a++L + v+Y+k L XP_027350393.1 145 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 189 99*********************55......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MANNPSDTPA DDFFEQILGL PTFASADSGL AAADVGLAGT ASPAPMMLQL NSADANPHLA 60 AGAAFHAPVY QLGLSLDQGK GGFMKPEDAS ASGKRFRDDV VDGRAKNVIP VFHGQPMPTT 120 MPAAPHPPAI RPRVRARRGQ ATDPHSIAER LRRERIAERI RALQELVPSV NKTDRAAMLD 180 EIVDYVKFLR LQVKVLSMSR LGGAGAVAPL VTDIPLSSVE VIIEKKYGDQ EEGGEGARNR 240 PAWDKWSNDG TERQVAKLME ENVGAAMQFL QSKALCIMPI SLASAIYQSQ PPDTSSIVKP 300 ETNPPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	150	155	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02590.2	1e-112	bHLH family protein