PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027350485.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family NF-YC
Protein Properties Length: 260aa    MW: 28819.6 Da    PI: 6.5837
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027350485.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC177.41.4e-55791821101
           NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 
                     ql++fw++q   iek+tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdfl
  XP_027350485.1  79 QLQQFWSSQyqeIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFL 173
                     89*****998899********************************************************************************** PP

           NF-YC  93 vdivprdel 101
                     vdivpr++l
  XP_027350485.1 174 VDIVPREDL 182
                     ******987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MDHQGHGQNP SMGVVGSGAQ LAYGSNPYQP SQISGAPGSV VTSVGTIPSA GQPAGAQLGQ  60
HQLAYQHIHQ QQQHQLQQQL QQFWSSQYQE IEKVTDFKNH SLPLARIKKI MKADEDVRMI  120
SAEAPVIFAR ACEMFILELT LRSWNHTEEN KRRTLQKNDI AAAITRTDIF DFLVDIVPRE  180
DLKDEVLASI PRGTMPVAGP ADALPYCYMP PQHAPQVGTA GVIMGKPVMD PNMYAQQSHP  240
YMAPQMWPQP PEQRPSSPEH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1152158RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.33e-85NF-YC family protein