PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350574.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 355aa MW: 39468.4 Da PI: 8.5429

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350574.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.2	3e-40	78	155	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +C v+gC++dl +++eyhrrh+vCe+hsk+pvvlv g++qrfCqqCsrfh+l efDe krsCr+rL++hn+rrrk+q+ XP_027350574.1 78 CCSVDGCNSDLRDCREYHRRHRVCEKHSKTPVVLVGGKQQRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQP 155 6**************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MDWDWKEFAW DPCGLELANG ALDGQKNEAT SVDLRLGEIS EEKSAPDTPK DPKDSKTVSS 60 PSGSSKRSRL QNGSQNMCCS VDGCNSDLRD CREYHRRHRV CEKHSKTPVV LVGGKQQRFC 120 QQCSRFHSLG EFDEVKRSCR KRLDGHNRRR RKPQPPSLFM AAEKFMYNYK GPRILQFGSP 180 QTYANPIMRN MWPATAKTGA ESDYDPPRLL YRIDKHRQDK GHPLWLENDP KVVNGNEAMH 240 GTPICPPIRG AIAPSAGGKS SRKLSSDGKP GSFDSGCALY LLSTLQSQSP ELSMVQSSIT 300 CPTQSPPVAA QNKPSGQVLV LDANTTTLHR SGMLQMGPDG LVENEDSLTF PSFWE

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MDWDWKEFAW DPCGLELANG ALDGQKNEAT SVDLRLGEIS EEKSAPDTPK DPKDSKTVSS  60
PSGSSKRSRL QNGSQNMCCS VDGCNSDLRD CREYHRRHRV CEKHSKTPVV LVGGKQQRFC  120
QQCSRFHSLG EFDEVKRSCR KRLDGHNRRR RKPQPPSLFM AAEKFMYNYK GPRILQFGSP  180
QTYANPIMRN MWPATAKTGA ESDYDPPRLL YRIDKHRQDK GHPLWLENDP KVVNGNEAMH  240
GTPICPPIRG AIAPSAGGKS SRKLSSDGKP GSFDSGCALY LLSTLQSQSP ELSMVQSSIT  300
CPTQSPPVAA QNKPSGQVLV LDANTTTLHR SGMLQMGPDG LVENEDSLTF PSFWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	136	153	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	1e-42	SBP family protein