PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027350857.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C3H
Protein Properties Length: 238aa    MW: 24937.5 Da    PI: 9.9806
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027350857.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH37.83.3e-12208232126
                     --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                     ykt+lC +fa+ G C +G+rC+FaHg
  XP_027350857.1 208 YKTKLCENFAK-GSCTFGERCHFAHG 232
                     9**********.*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MDIRKRGRPE HSFNINGGLK KSKQEMESLS TGVGSKSKPC TKFFSTAGCP FGEGCHFLHF  60
VPGGYNAVAQ MMNLTPAAPP ASRNVAGAMG PPAAGRIGGR MEPPPGPASS FGANATAKIS  120
VEASLAGAII GKGGVNSKQI CRQTGAKLSI REHESDPNLR NIELEGSFEQ IKEASNMVKD  180
LLLTLQMSAL PKTTAGVPGA PAPHGSNYKT KLCENFAKGS CTFGERCHFA HGAAELRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06770.11e-110C3H family protein