PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027350858.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C3H
Protein Properties Length: 235aa    MW: 24738.3 Da    PI: 9.9806
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027350858.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH37.83.2e-12205229126
                     --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                     ykt+lC +fa+ G C +G+rC+FaHg
  XP_027350858.1 205 YKTKLCENFAK-GSCTFGERCHFAHG 229
                     9**********.*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MDIRKRGRPE HSFNINGGLK KSKQEMESLS TGVGSKSKPC TKFFSTAGCP FGEGCHFLHF  60
VPGGYNAVAQ MMNLTPAAPP ASRNVMGPPA AGRIGGRMEP PPGPASSFGA NATAKISVEA  120
SLAGAIIGKG GVNSKQICRQ TGAKLSIREH ESDPNLRNIE LEGSFEQIKE ASNMVKDLLL  180
TLQMSALPKT TAGVPGAPAP HGSNYKTKLC ENFAKGSCTF GERCHFAHGA AELRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12130.11e-109C3H family protein