PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027351001.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HB-other

Protein Properties

Length: 1020aa MW: 113436 Da PI: 9.7307

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027351001.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	16.3	1.7e-05	69	125	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ ++ ++++F + +s++e +e+++ g+t +qV+ +F +R + ++ XP_027351001.1 69 KRPRDLLNPKAVNYMQSVFSIKDVISKKESREISALFGVTVTQVRDFFTSQRSRVRR 125 799**************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 1020 aa Download sequence
MDVWNEDFLE LDVGSSVESF QRFLVSQREL FHSQIHQFQE IVVTQCKLTG VNPLSQEMAA 60 GALSIKIGKR PRDLLNPKAV NYMQSVFSIK DVISKKESRE ISALFGVTVT QVRDFFTSQR 120 SRVRRLVQLS RERALISKSC EESHDDQINT DPVRPINLAP LDSAGPTNAE EASCSAQEAD 180 LSDLDDSDKQ FVDNIFSLMQ KEETFSGQEK LMEWILTVQN FSVLLWFLTR GGAMTLATWL 240 SKAFVEEQTS VLLLILKVLC HLPLHKALPS HISAILQSVN RLRFYRTSDI SNRARVLLSK 300 WSKLLARNQA IKKPNGVKPS SDGQKAIMLS QSIGQFMVSE SWHSNIDVPE DILALSNECS 360 DNVRKGESSQ SVKLLPPSSD DSKKPTLGVS SSQSRERRKV QLVEQPGQKS VSRSSQGTRA 420 GPVSQGRPMS ADDIQKAKMR ALFMRSKYGK AGSSKESKET KIDSLNKPQT NQASIAACSA 480 KVPTSLKIED KKPLLLASKT TNRPEASYSK PKMDLKEPLW EKCKRVQIPW KTPAEVKLQD 540 TWRVGAGENS KEVDVQKNRN RREKETIYKI VQEVPSNPKE PWDLEMDYDD TLTLEIPIEQ 600 LPDGDGAEIA VAPNQVATHI VQGVASTSTA TAEPDLELLA VLLKNPELVF ALTSGQSGSI 660 PSDETVKLLD MIKRGGLNLG LSENTNGNYG MSVKAPEKVE VSLPSPTPLS DPRTSGWSTA 720 ASKNPFSRRP DRFIQSPAAV ATTNSLSQIP ITGTTVRQQP TVAAPSLRQL TTSSVSPYSL 780 PQATNIVPEK QPSLAHSSVH MQTPSSDIGL TMKKNLITAN ASSVNLPGTH SSLAMRADGT 840 NYLKPVPNLS VQQEGLSNSF SQPFMLPSPT PPSHSATPQR RHPQLVPEAH YTEPSYRNSV 900 NSYPPQTEKS GHVSDMWRIR QDISSSYHSQ RNHNNYNTMV GGSMQSGSWD RNNHGREEFE 960 SWSPENSPTR NPRYVPGRNF PESRMNHARN HRPEWSRQRG SSGHWDPGRQ GNRRWHDQRR

Sequence ? help Back to Top

Protein Sequence Length: 1020 aa Download sequence

MDVWNEDFLE LDVGSSVESF QRFLVSQREL FHSQIHQFQE IVVTQCKLTG VNPLSQEMAA  60
GALSIKIGKR PRDLLNPKAV NYMQSVFSIK DVISKKESRE ISALFGVTVT QVRDFFTSQR  120
SRVRRLVQLS RERALISKSC EESHDDQINT DPVRPINLAP LDSAGPTNAE EASCSAQEAD  180
LSDLDDSDKQ FVDNIFSLMQ KEETFSGQEK LMEWILTVQN FSVLLWFLTR GGAMTLATWL  240
SKAFVEEQTS VLLLILKVLC HLPLHKALPS HISAILQSVN RLRFYRTSDI SNRARVLLSK  300
WSKLLARNQA IKKPNGVKPS SDGQKAIMLS QSIGQFMVSE SWHSNIDVPE DILALSNECS  360
DNVRKGESSQ SVKLLPPSSD DSKKPTLGVS SSQSRERRKV QLVEQPGQKS VSRSSQGTRA  420
GPVSQGRPMS ADDIQKAKMR ALFMRSKYGK AGSSKESKET KIDSLNKPQT NQASIAACSA  480
KVPTSLKIED KKPLLLASKT TNRPEASYSK PKMDLKEPLW EKCKRVQIPW KTPAEVKLQD  540
TWRVGAGENS KEVDVQKNRN RREKETIYKI VQEVPSNPKE PWDLEMDYDD TLTLEIPIEQ  600
LPDGDGAEIA VAPNQVATHI VQGVASTSTA TAEPDLELLA VLLKNPELVF ALTSGQSGSI  660
PSDETVKLLD MIKRGGLNLG LSENTNGNYG MSVKAPEKVE VSLPSPTPLS DPRTSGWSTA  720
ASKNPFSRRP DRFIQSPAAV ATTNSLSQIP ITGTTVRQQP TVAAPSLRQL TTSSVSPYSL  780
PQATNIVPEK QPSLAHSSVH MQTPSSDIGL TMKKNLITAN ASSVNLPGTH SSLAMRADGT  840
NYLKPVPNLS VQQEGLSNSF SQPFMLPSPT PPSHSATPQR RHPQLVPEAH YTEPSYRNSV  900
NSYPPQTEKS GHVSDMWRIR QDISSSYHSQ RNHNNYNTMV GGSMQSGSWD RNNHGREEFE  960
SWSPENSPTR NPRYVPGRNF PESRMNHARN HRPEWSRQRG SSGHWDPGRQ GNRRWHDQRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	1e-147	HB-other family protein