PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027351034.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 170aa MW: 19347.2 Da PI: 5.6772

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027351034.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	125.5	2.5e-39	14	111	1	98
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaC++lrr+C ++C lapyfp ++ +kf vh++FGasnv+k+++ ++e++reda++s+vyeA ar+rdPvyG++g i +lq+ +++lka+l+ XP_027351034.1 14 PCAACRMLRRRCDSKCLLAPYFPTDEIEKFVGVHRVFGASNVIKMIQMVEETKREDAVKSMVYEATARLRDPVYGSAGAIYQLQKMIQELKAQLE 108 7*********************************************************************************************9 PP DUF260 96 llk 98 +++ XP_027351034.1 109 SIN 111 876 PP

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence
MGFHAEAKAR IHQPCAACRM LRRRCDSKCL LAPYFPTDEI EKFVGVHRVF GASNVIKMIQ 60 MVEETKREDA VKSMVYEATA RLRDPVYGSA GAIYQLQKMI QELKAQLESI NTRVSELREQ 120 KDQLLSISNN NAQGHLDPLS LEFDCSMVLD PFEFPVEGDW VYSIDNVNTC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28500.1	1e-45	LBD family protein