PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027351131.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 231aa MW: 25243.6 Da PI: 8.7267

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027351131.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	125.5	2.5e-39	32	133	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC C++apyf ++q p++fa+vhk+FGasnv kll ++p e+r++a+++++yeA+ar+ dPvyG+v+++l+lqqq+++l+ el XP_027351131.1 32 PCGACKFLRRKCHGACTFAPYFSSDQgPARFAAVHKVFGASNVAKLLLHIPMERRREAVATITYEAQARLADPVYGCVSTVLALQQQVASLQGEL 126 7**********************999*************************************************************** PP DUF260 95 allkeel 101 a+++++l XP_027351131.1 127 AMVQNQL 133 *9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MAEAQVGGNG SSGVARRKAL RRAMGAPPSQ PPCGACKFLR RKCHGACTFA PYFSSDQGPA 60 RFAAVHKVFG ASNVAKLLLH IPMERRREAV ATITYEAQAR LADPVYGCVS TVLALQQQVA 120 SLQGELAMVQ NQLINAKLAY ASALQNMQQQ QQHYQPYMNV PVQPSFSNNS SASTNPMNIN 180 YFNPGFNHAM EAAPSSHSFE PLQMSPLSHD EEGDEEESRI PFNRGIVLNR H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03760.1	1e-52	LBD family protein