PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027351285.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family WOX
Protein Properties Length: 207aa    MW: 24037.1 Da    PI: 9.0122
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027351285.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.12.1e-20766357
                    --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    +R+++t+eql +Leel+++  r+psa+++++++++l    +++ ++V++WFqN++a++++
  XP_027351285.1  7 SRWSPTTEQLMILEELYRSgIRTPSASQIQQITTHLsfygRIEGKNVFYWFQNHKARDRQ 66
                    7*****************99*************************************996 PP
2Wus_type_Homeobox118.23.8e-38667364
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       ++RW+Pt+eQ++iLeely+sG+rtP++++iq+it++L+ yG+ie+kNVfyWFQN+kaR+rqk
     XP_027351285.1  6 SSRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQK 67
                       79***********************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MSPPGSSRWS PTTEQLMILE ELYRSGIRTP SASQIQQITT HLSFYGRIEG KNVFYWFQNH  60
KARDRQKLRR KLNKQLQLQQ QQQQQQQQLQ VHHHFQLNQD ITNHFVGTFG YPPCSPTQDF  120
SFYNSATLLF QGGAANTTEE ALNCKWNVYN PQSNLVEKKE MTLCNYGWTL VDVNQASSCC  180
TRPLKTLDLF PLTTTRIKED CNTSKQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28610.13e-35WOX family protein