PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027351467.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family bHLH
Protein Properties Length: 108aa    MW: 12140.2 Da    PI: 9.7405
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027351467.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.30.000332411155
                    HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    rR +++ ++   L++l+ +      +K + a++L +A  YIk Lq
  XP_027351467.1  2 RRNQKLSDKVTILQKLVSPF-----GKTDTASVLHEASLYIKLLQ 41
                    78889999999999999998.....8****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    
MRRNQKLSDK VTILQKLVSP FGKTDTASVL HEASLYIKLL QAQIQTLFQM LSFSYTSTTK  60
VPHMQDCGDK LLVDLRSRGL CLVPISITQT VTMEDQIHHA SASRIILP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21340.14e-21bHLH family protein