PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027351473.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

NF-YC

Protein Properties

Length: 214aa MW: 24319.9 Da PI: 6.0118

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027351473.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	118	4.3e-37	37	138	2	99
NF-YC 2 lksfwekq...iekatdfk.nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 l+ fw++q i++++ ++ ++ lPlari++i+k+d v+misae+P+l++kace+fi elt+r+w+ aee+++rt+k +dia+a+ +t++f fl XP_027351473.1 37 LRLFWQEQlfsIQSTQALRsQQPLPLARIRRIIKTDSGVQMISAETPILMAKACEIFIQELTFRAWMLAEESNKRTVKPCDIAKAILQTEVFHFL 131 899***988888888886788******************************************************************** PP NF-YC 93 vdivprd 99 d+vp d XP_027351473.1 132 SDVVPSD 138 ***98 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MDFNSNSVSS NLPPNSMPMP PYPMDQYRQE ETEVEKLRLF WQEQLFSIQS TQALRSQQPL 60 PLARIRRIIK TDSGVQMISA ETPILMAKAC EIFIQELTFR AWMLAEESNK RTVKPCDIAK 120 AILQTEVFHF LSDVVPSDLL RFCAFDTKHE ENAGNIAEGS QASLPHPAGL MGNPMMNMGS 180 DQVARNHLIP QSYMMQPPFM PSDQLPYNCH TKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08970.3	3e-35	NF-YC family protein