PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027351537.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 568aa MW: 62112.7 Da PI: 8.1911

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027351537.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.5	2.7e-14	359	404	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 hn E++RR+riN+++ +L+el+P++ K++Ka++L A++Y+k L XP_027351537.1 359 VHNLSEKKRRERINKKMRTLKELIPNC-----NKVDKASMLDDAIDYLKTL 404 5***********************8.....6**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MLDSARSGMT RNSSHLASIY DNDFLELVCE NGQVVVRGGS SNRTQKTPSC IGYSISPSRK 60 QTTDEDACIA KGTRLSTLYT LLDHFPPQRD ADKSSSNQSN DQESSQSSHT KNSCKLNEEF 120 ANLLGPEKDY KPVTTDNVHL CPYSSQQCLP SSPLKKQRTD PGQAPATNSH NLGCGQRAQK 180 VNFSNFLIPA VFLKSTTNSA TEPTRNALSG RVVEEIEARK VEKASAEGSH GLTGFQKQTS 240 FVERRPEAPL DEHSEAVGNN SCGLGIHRSN TQRCNQTSSS GALGAKGKAN TNLCNEPLLA 300 SPSVCSLGAS NDPNLAIRLH EDTDDPAYLS DNDEEAEDLL QQTPDREGNR IKRSRNAEVH 360 NLSEKKRRER INKKMRTLKE LIPNCNKVDK ASMLDDAIDY LKTLKLQLQI MSMGSGLWPL 420 MMLPAAAHHI NGPHLPQLMG AGMGFRPPQL PIPLPIPPLS ASAITNNRFQ MFGFPNQIPP 480 MPIPHAPYFP IIGNSSTTQP HLATSPTATT NLREHLANSS TPQVAIPNNI NSDFHAKVQN 540 AVKQVPNQVS LHHHNTSPLA IPFIFPQR

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MLDSARSGMT RNSSHLASIY DNDFLELVCE NGQVVVRGGS SNRTQKTPSC IGYSISPSRK  60
QTTDEDACIA KGTRLSTLYT LLDHFPPQRD ADKSSSNQSN DQESSQSSHT KNSCKLNEEF  120
ANLLGPEKDY KPVTTDNVHL CPYSSQQCLP SSPLKKQRTD PGQAPATNSH NLGCGQRAQK  180
VNFSNFLIPA VFLKSTTNSA TEPTRNALSG RVVEEIEARK VEKASAEGSH GLTGFQKQTS  240
FVERRPEAPL DEHSEAVGNN SCGLGIHRSN TQRCNQTSSS GALGAKGKAN TNLCNEPLLA  300
SPSVCSLGAS NDPNLAIRLH EDTDDPAYLS DNDEEAEDLL QQTPDREGNR IKRSRNAEVH  360
NLSEKKRRER INKKMRTLKE LIPNCNKVDK ASMLDDAIDY LKTLKLQLQI MSMGSGLWPL  420
MMLPAAAHHI NGPHLPQLMG AGMGFRPPQL PIPLPIPPLS ASAITNNRFQ MFGFPNQIPP  480
MPIPHAPYFP IIGNSSTTQP HLATSPTATT NLREHLANSS TPQVAIPNNI NSDFHAKVQN  540
AVKQVPNQVS LHHHNTSPLA IPFIFPQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	2e-33	bHLH family protein