PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027351697.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 688aa MW: 75867.4 Da PI: 7.7262

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027351697.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.1	3.4e-23	118	219	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ ++ + + +d +g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF + + XP_027351697.1 118 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--NILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFL--RAE 208 89**************************997656666..69999****************************************..448 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_027351697.1 209 NGDLCVGIRRA 219 8999**997 PP
2	Auxin_resp	108.2	9.1e-36	287	369	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++FevvY+Prast+eF+vk++ v+++ ++++++GmRfkm fetedss++++ +Gt+++v+ +dp rWp+S+Wr+L+ XP_027351697.1 287 AATLAANMQPFEVVYYPRASTPEFCVKASLVRSTSQIRWCPGMRFKMPFETEDSSRISWfMGTISSVQVADP-RWPDSPWRLLQ 369 68899*****************************************************************.*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 688 aa Download sequence
MIIMDTIKGK VEKCLDPQLW HACAGGMVQM PLVNAKVFYF PQGHAEHACG PVDFRAGSKI 60 PPFIQCRVAA IKYMADPETD EVYAKLSLVP MNNNEADFED DGVGGINGSE TKDKPPSFAK 120 TLTQSDANNG GGFSVPRYCA ETIFPRLDYS ADPPVQNILA KDVHGETWKF RHIYRGTPRR 180 HLLTTGWSTF VNHKKLVAGD SIVFLRAENG DLCVGIRRAK KGIGGGPETS SGWNSVGGIC 240 PLPYGGFSSF LKDEDNQFMR NGNSNVLSPS ANLMGKGKVR PEAVIEAATL AANMQPFEVV 300 YYPRASTPEF CVKASLVRST SQIRWCPGMR FKMPFETEDS SRISWFMGTI SSVQVADPRW 360 PDSPWRLLQV TWDEPELLQN VKRVSPWLVE IVSNMPSILS PFSPPRKKLR FPQPPDFPLD 420 GQISMPTFPS NFLGPNNPFG FLPESTPAGM QGARHAISYG ISLSNLHHNK HTGLFQAGFP 480 PLDHAASPMR VSNNPPLLKA STNENVSCLL SMENSTQSSK KVDGFKAPHL MLFGQKILTE 540 HQISLRNSTR TVSPVITSSS DGNADKVTNF SNGSCSALHP QLSSCEGFRW FMDHHKETSL 600 ETGQCKVFME LEDVGRTMDL SLLGSYDELY KKLADMFGIK KSEVLSHVLY RDVTGAVKHI 660 GDEAFSDFTR TARRLTILMD SSSDNGGV

Sequence ? help Back to Top

Protein Sequence Length: 688 aa Download sequence

MIIMDTIKGK VEKCLDPQLW HACAGGMVQM PLVNAKVFYF PQGHAEHACG PVDFRAGSKI  60
PPFIQCRVAA IKYMADPETD EVYAKLSLVP MNNNEADFED DGVGGINGSE TKDKPPSFAK  120
TLTQSDANNG GGFSVPRYCA ETIFPRLDYS ADPPVQNILA KDVHGETWKF RHIYRGTPRR  180
HLLTTGWSTF VNHKKLVAGD SIVFLRAENG DLCVGIRRAK KGIGGGPETS SGWNSVGGIC  240
PLPYGGFSSF LKDEDNQFMR NGNSNVLSPS ANLMGKGKVR PEAVIEAATL AANMQPFEVV  300
YYPRASTPEF CVKASLVRST SQIRWCPGMR FKMPFETEDS SRISWFMGTI SSVQVADPRW  360
PDSPWRLLQV TWDEPELLQN VKRVSPWLVE IVSNMPSILS PFSPPRKKLR FPQPPDFPLD  420
GQISMPTFPS NFLGPNNPFG FLPESTPAGM QGARHAISYG ISLSNLHHNK HTGLFQAGFP  480
PLDHAASPMR VSNNPPLLKA STNENVSCLL SMENSTQSSK KVDGFKAPHL MLFGQKILTE  540
HQISLRNSTR TVSPVITSSS DGNADKVTNF SNGSCSALHP QLSSCEGFRW FMDHHKETSL  600
ETGQCKVFME LEDVGRTMDL SLLGSYDELY KKLADMFGIK KSEVLSHVLY RDVTGAVKHI  660
GDEAFSDFTR TARRLTILMD SSSDNGGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein