PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027351761.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C3H

Protein Properties

Length: 337aa MW: 38440.4 Da PI: 7.6555

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027351761.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	37.6	3.6e-12	201	226	1	26
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 y +C+++ +tG+C yGd CkF+H+ XP_027351761.1 201 YQPDICKDYKETGYCGYGDACKFMHD 226 67789********************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MKNLWFLFSA FLLVTTILLF AVFCLFSVCS FFRKPVNRKN IRKRTIDNED EEDSNKESSL 60 LHTQKKTLRP DNKLYFSTGS SKSSAPAEPS EEPGKPVFQF ESSKEIQVQH DSKATAILET 120 ETEFTKDARA IRERALKQAA ASLKGKSTNS EDEKLYKGIN SYKDYKAGFR REQTIASEKA 180 GGAHGPLRAS AHIRVSARFD YQPDICKDYK ETGYCGYGDA CKFMHDRGDY KSGWQLEKEW 240 EEAEKAKRMR LAAGEDADEE EGANLTDEDD DDSLPFACFI CRNPFVDPVV TKCKHYFCEH 300 CALKHHAKNK KCFVCNQPTL GIFNVAHEIR RKMAEDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01350.1	1e-138	C3H family protein