PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027351763.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C3H

Protein Properties

Length: 328aa MW: 37335.5 Da PI: 6.5122

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027351763.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	37.7	3.5e-12	192	217	1	26
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 y +C+++ +tG+C yGd CkF+H+ XP_027351763.1 192 YQPDICKDYKETGYCGYGDACKFMHD 217 67789********************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MEDSDQLAKS VEDQQTEQVC SFFRKPVNRK NIRKRTIDNE DEEDSNKESS LLHTQKKTLR 60 PDNKLYFSTG SSKSSAPAEP SEEPGKPVFQ FESSKEIQVQ HDSKATAILE TETEFTKDAR 120 AIRERALKQA AASLKGKSTN SEDEKLYKGI NSYKDYKAGF RREQTIASEK AGGAHGPLRA 180 SAHIRVSARF DYQPDICKDY KETGYCGYGD ACKFMHDRGD YKSGWQLEKE WEEAEKAKRM 240 RLAAGEDADE EEGANLTDED DDDSLPFACF ICRNPFVDPV VTKCKHYFCE HCALKHHAKN 300 KKCFVCNQPT LGIFNVAHEI RRKMAEDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01350.1	1e-141	C3H family protein