PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027352057.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 323aa MW: 35521.3 Da PI: 4.7682

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027352057.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	86.3	3.6e-27	42	134	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rWt+qe+l+Li+++++ e+r++ g+ + +p+W+ vs++++++g++r+p+qC+++w+nl+++ykkike+e++ ++e++s + + ++l+ XP_027352057.1 42 RWTRQEILVLIQGKSDAESRFKPGRgggsafgSSEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESQARDETESFWLMRNDLR 134 8*******************8866677777*******************************************9999999998888875 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MALDNPSNPN SVDGEPDGAG NGAPPSSAVD GDDGRPAARL PRWTRQEILV LIQGKSDAES 60 RFKPGRGGGS AFGSSEPKWA LVSSYCKKHG VNREPVQCRK RWSNLAGDYK KIKEWESQAR 120 DETESFWLMR NDLRRERKLP GYFDREVYDI LDSPSTAPPP PVEAPSTVVD EEVHLYDSNR 180 RVGGEDGLFS DCEKDEVLGT AKDVPAPVPI SEKQYQLHLQ GCEGEGNAQG GTNEKQPASN 240 PEMGSTSQGG QKRKRCATDG EEEILQSQLI DVLEKNGKML RDQLEAQNMN FQLDRQQQKD 300 TASTIVAVLD KLADALGRIA DKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	5e-98	Trihelix family protein