PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027352210.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 323aa MW: 35853.9 Da PI: 7.6871

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027352210.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.3	7.4e-18	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+d+++q+G+g +W + ++++g++R++k+c++rw++yl XP_027352210.1 14 KGPWSPEEDAKLKDYIEQHGTGgNWIALPQKVGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37.7	4.8e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ Ed+++ ++++ G++ W+ Ia+ ++ gRt++++k++w++ XP_027352210.1 69 GQFSDAEDKIICNLFASIGSR-WSIIASQLP-GRTDNDIKNYWNT 111 7899***************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKDYIE QHGTGGNWIA LPQKVGLKRC GKSCRLRWLN 60 YLRPNIKHGQ FSDAEDKIIC NLFASIGSRW SIIASQLPGR TDNDIKNYWN TKLKKKMMAM 120 NPSPQRKPEQ VSLLSILQSS TSSLPLSFRD SNNSYYNPHG SFTGSGSFSY SSSLLSGNSY 180 ASAGSIFQAQ ESFMDTTQKC RYKDSNSIYV FGGEATSCSS SDGSCNNQIS HVMEPEFGYG 240 EGSGDATFVG VNNSFYSGVE DIQKLMFSNV GSVSGYTEKQ NGLWGENQLD YGLEEIKQLI 300 STNNSGSNFL FDEKKTEERV MYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65790.1	1e-76	MYB family protein