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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_027352283.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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| Family | ERF | ||||||||
| Protein Properties | Length: 234aa MW: 25147.8 Da PI: 8.2371 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 63.2 | 5.4e-20 | 19 | 68 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae Aa+a++ a++k++g
XP_027352283.1 19 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAAAAYDVAALKFKG 68
7********.**********94....45************************987 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 234 aa Download sequence |
MQDPSQQPLN QGNIARKRHY RGVRQRPWGK WAAEIRDPKK AARVWLGTFD TAEAAAAAYD 60 VAALKFKGSK AKLNFPEHVL LTSTSPCLTA TTATVNATIA TAVASPTTTN NNNVSSALAS 120 PASLLPQQVY QPLPPSPLLS SSEEGFPNLM QYAQLLRSSD DNDLQRVALG LHHYHNDPFL 180 DSTSSTLFSS STAYVGVHDH QPQGGDGTSA PKGREYFGSS GSCYFEGSGS HDKN |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G61890.1 | 2e-32 | ERF family protein | ||||




