PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027352660.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 386aa MW: 42707.5 Da PI: 8.8959

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027352660.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.2	3e-13	314	359	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ k s a++L +AveYIk+Lq XP_027352660.1 314 SIAERVRRTRISERIRKLQELVPNM----EKQTSTADMLDLAVEYIKDLQ 359 689*******************7....477***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MDSNSGYQQP SSGLLRFRSA PAPVLANFKQ GEGVAPNNGT SWEGSEPGLR FFNSGDGNNT 60 ASLSLREFVD NNKPSNDNKA HNESSISSPL SRMNSQQCYT YSTSSVLPLR HNSSVSSSMM 120 MGSMGTEQVK TFNSHLLRQS SFPAGHFFNN IAFQNGYDTM KGVGSYGGVN ESDDELSLSM 180 NRMKNQISFS SMLSQTSKMG NEGIGATNTD EGRPGCSNGD ARYYGTGFPY TSWNETSHLS 240 DKFVGSKRQR NSNDELLSDV QNGELGNQVH TLSHHLSLPS ASSEIFSMEK MLQFPDSVPC 300 KIRAKRGFAT HPRSIAERVR RTRISERIRK LQELVPNMEK QTSTADMLDL AVEYIKDLQK 360 QFKTLGEKRA KCKCVNMKKS ETDQIT

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MDSNSGYQQP SSGLLRFRSA PAPVLANFKQ GEGVAPNNGT SWEGSEPGLR FFNSGDGNNT  60
ASLSLREFVD NNKPSNDNKA HNESSISSPL SRMNSQQCYT YSTSSVLPLR HNSSVSSSMM  120
MGSMGTEQVK TFNSHLLRQS SFPAGHFFNN IAFQNGYDTM KGVGSYGGVN ESDDELSLSM  180
NRMKNQISFS SMLSQTSKMG NEGIGATNTD EGRPGCSNGD ARYYGTGFPY TSWNETSHLS  240
DKFVGSKRQR NSNDELLSDV QNGELGNQVH TLSHHLSLPS ASSEIFSMEK MLQFPDSVPC  300
KIRAKRGFAT HPRSIAERVR RTRISERIRK LQELVPNMEK QTSTADMLDL AVEYIKDLQK  360
QFKTLGEKRA KCKCVNMKKS ETDQIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	4e-56	bHLH family protein