PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027352691.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C2H2
Protein Properties Length: 251aa    MW: 28636.5 Da    PI: 9.8005
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027352691.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2120.0006394116223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C+ C++++++  +L  H +  H
  XP_027352691.1  94 SCSVCSRVYPTTRLLSIHVSEvH 116
                     6*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MEVEQNQNLQ LGFPFWKPIR RRFGPDSPFF ATGNLERELL AKQVALQLTE EKQQLENWIQ  60
EEGREVFCPI VGCGARLTSM EDFENHYNAR HTASCSVCSR VYPTTRLLSI HVSEVHDSFF  120
QAKVARGYDV YECLVEGCGL KFKSYNSRQQ HLVDKHKFPI SFEFFKKSRP SKKQRSKSQR  180
KQTVRKEDAS GMMEVENAAM DDLVLAVSKL STSDSIPSSI SFGRRHKGLS FVPRAVQRGN  240
GSNSSASMTK R
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1172178KKQRSKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14140.13e-98C2H2 family protein