PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027352695.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 698aa MW: 76094.4 Da PI: 6.7485

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027352695.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.7	6.4e-16	451	497	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+k Lq XP_027352695.1 451 VHNLSERRRRDRINEKMRALQELIPNC-----NKADKASMLDEAIEYLKTLQ 497 5***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 698 aa Download sequence
MSLHELYYRM AEGKLDPKEI NNTCAAPDQS SRPKNDLFEL VWENGHISVQ GQSSRAKKSS 60 TLKNLHSPMG EDKDKEVGYN IKMGKYTELK EITRPLPSSE VDFSQEEQDL IPWFNYGMIN 120 SLQHEYSSDF HQLSGGTMND ITTSNNFSLL VRRNSCNKIH SSCHVLSSEQ GILSKGSSAA 180 AGEVDSDTPR TKASTTNHLY QPSSMHQSQR SFASVRSRIS DIAENNTNNA TQHEQIPLIP 240 SASRGFSSLQ GPVMSSNSSN MMNFSHFAKP AVIVKANLES IGLTPRSASV GVKNKGVAAT 300 GSNPTESTQV DLSGECPHKS PIHCYQVVEP SKFEPKSAEH DADVSTKSEP SGKEDVPKID 360 QKSYLVVGES GRKEQEALEK RVEPAVVSSS VCSGTGAERG SHQPNQNLKR KSLDTEDFEC 420 HSEDIEEESV GVKKEAPARR VGSKRSRSAE VHNLSERRRR DRINEKMRAL QELIPNCNKA 480 DKASMLDEAI EYLKTLQLQL QIMSMGTSLY MPTMMLPAGM HHMHASHMTP FPPTGISMQM 540 GLGCGMGMAD VNDGSSTFPM IQVPKIQATQ IPVAHALGSN ALNGMARSNP QVFGMTMPHA 600 PMFSFSGEPL MNIPALGLNA CGTTGLMKAM DLASPSSLKD PMPTMNSHVV QNTNACNSTN 660 HMSTQCEATI GGFEHSTCEL NFGHASSATD RAVNHGYD

Sequence ? help Back to Top

Protein Sequence Length: 698 aa Download sequence

MSLHELYYRM AEGKLDPKEI NNTCAAPDQS SRPKNDLFEL VWENGHISVQ GQSSRAKKSS  60
TLKNLHSPMG EDKDKEVGYN IKMGKYTELK EITRPLPSSE VDFSQEEQDL IPWFNYGMIN  120
SLQHEYSSDF HQLSGGTMND ITTSNNFSLL VRRNSCNKIH SSCHVLSSEQ GILSKGSSAA  180
AGEVDSDTPR TKASTTNHLY QPSSMHQSQR SFASVRSRIS DIAENNTNNA TQHEQIPLIP  240
SASRGFSSLQ GPVMSSNSSN MMNFSHFAKP AVIVKANLES IGLTPRSASV GVKNKGVAAT  300
GSNPTESTQV DLSGECPHKS PIHCYQVVEP SKFEPKSAEH DADVSTKSEP SGKEDVPKID  360
QKSYLVVGES GRKEQEALEK RVEPAVVSSS VCSGTGAERG SHQPNQNLKR KSLDTEDFEC  420
HSEDIEEESV GVKKEAPARR VGSKRSRSAE VHNLSERRRR DRINEKMRAL QELIPNCNKA  480
DKASMLDEAI EYLKTLQLQL QIMSMGTSLY MPTMMLPAGM HHMHASHMTP FPPTGISMQM  540
GLGCGMGMAD VNDGSSTFPM IQVPKIQATQ IPVAHALGSN ALNGMARSNP QVFGMTMPHA  600
PMFSFSGEPL MNIPALGLNA CGTTGLMKAM DLASPSSLKD PMPTMNSHVV QNTNACNSTN  660
HMSTQCEATI GGFEHSTCEL NFGHASSATD RAVNHGYD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	456	461	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	4e-64	bHLH family protein