PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027352712.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 263aa    MW: 30270.2 Da    PI: 6.9543
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027352712.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.22.9e-1878130456
                     -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     + +++ eq+++Le+ Fe  +++  e++ +LAk lgL+ rq+ +WFqNrRa++k
  XP_027352712.1  78 KKRLNLEQVKALEKSFELGNKLEPERKDQLAKALGLQPRQIAIWFQNRRARWK 130
                     4568889*********************************************9 PP
2HD-ZIP_I/II123.41.1e-3976168193
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     ekk+rl+ eqvk+LE+sFe  +kLeperK +la++Lglqprq+a+WFqnrRAR+ktkqlEk+y+ Lk +++a+k+ene+L++++++L++el++
  XP_027352712.1  76 EKKKRLNLEQVKALEKSFELGNKLEPERKDQLAKALGLQPRQIAIWFQNRRARWKTKQLEKEYKLLKMHFEAVKAENEALKAQNKKLHAELQA 168
                     69***************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MAFPPTSQAF MFNTHEEVHH HFPSTSLNAL PSLPPQHFQG GAPFVLKRSM SFSGIENKCD  60
DGEEELSDDG LLQCGEKKKR LNLEQVKALE KSFELGNKLE PERKDQLAKA LGLQPRQIAI  120
WFQNRRARWK TKQLEKEYKL LKMHFEAVKA ENEALKAQNK KLHAELQALK GRDWCEAGTI  180
KKEAECSWSN GSDNSSDINL DLSRTPVLNS HVSFQKDKSL LPSSLKPTSM TQFLQDEGFC  240
NMFHNIDEQQ NFWPWPDQEH HFH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125133RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15150.19e-69HD-ZIP family protein