PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027352886.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 159aa MW: 17737.6 Da PI: 9.8038

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027352886.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.7	0.00081	31	53	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs+ L H +H XP_027352886.1 31 FECKTCNRKFSSFQALGGHRASH 53 89**********99999998887 PP
2	zf-C2H2	12.3	0.00052	80	102	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs L H+r+H XP_027352886.1 80 HECSICGLGFSLGQALGGHMRKH 102 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 159 aa Download sequence
MKRQRDNCLM LLCSPQESNK AQEKSFGSVE FECKTCNRKF SSFQALGGHR ASHKRPKLEG 60 GEELKEEAKS LSLWNKPKMH ECSICGLGFS LGQALGGHMR KHRGAINEGF SSINQVIAKI 120 PVLKRSNSTR VMCLDLNLTP LENDLMFGMK SPPVPLSLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	1e-38	C2H2 family protein