PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027352961.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 211aa MW: 23285.5 Da PI: 7.9498

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027352961.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	127.8	4.9e-40	14	115	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkCa+dC++apyf++eq p++fa++hk+FGasnv+kll ++p ++r +a+ +++yeA+ar+rdPvyG+v++i++lqqq+++l+a+l XP_027352961.1 14 PCGACKFLRRKCAADCIFAPYFCSEQgPARFAAIHKVFGASNVSKLLLHIPAHDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQL 108 7***********************99***************************************************************** PP DUF260 95 allkeel 101 ++k++l XP_027352961.1 109 MQVKAQL 115 *999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MSMASSSGNG SGSPCGACKF LRRKCAADCI FAPYFCSEQG PARFAAIHKV FGASNVSKLL 60 LHIPAHDRCE AVVTIAYEAQ ARIRDPVYGC VSHIFALQQQ VACLQAQLMQ VKAQLAQNLM 120 ESRNIEKQWP GNNNVAGLPM NSSFCPNNYM NPISPQSSME SIDHNSINDG MGMQDIQSRE 180 DFSFQASSKK RSYNNHDLGE LQELALRMMR N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42430.1	2e-59	LBD family protein