PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027353194.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HD-ZIP

Protein Properties

Length: 175aa MW: 20329 Da PI: 10.0153

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027353194.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.9	9.6e-20	21	75	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +f++eq++ Le++Fe ++ + +++ eLA++lgL+ rqV +WFqN+Ra++k XP_027353194.1 21 KNKIKFSDEQVKSLESMFETDSRLESTKKLELARELGLQPRQVAIWFQNKRARWK 75 67889*************************************************9 PP
2	HD-ZIP_I/II	115.2	4e-37	22	113	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +k ++s+eqvk+LE++Fe++++Le+++K elareLglqprqva+WFqn+RAR+k+kql +dy+ L+++y++l+++ ++L+ke+++L +l++ XP_027353194.1 22 NKIKFSDEQVKSLESMFETDSRLESTKKLELARELGLQPRQVAIWFQNKRARWKSKQLQRDYTILRAKYNTLSSHFDALQKEHQALLIQLQK 113 689***********************************************************************************999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MEYSRSSVTH PSAATRKKRS KNKIKFSDEQ VKSLESMFET DSRLESTKKL ELARELGLQP 60 RQVAIWFQNK RARWKSKQLQ RDYTILRAKY NTLSSHFDAL QKEHQALLIQ LQKLNHQPLE 120 QTQSCKQEVK PGPSTEPALL NLAEHADASF TSPQDWAMFR LGQSTGDYQL WDFCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.1	2e-41	HD-ZIP family protein