PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027353308.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 462aa MW: 52986.6 Da PI: 6.6819

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027353308.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	76.9	3.2e-24	110	209	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpy 81 +Wt+ +v++Li a+ +++++ +++ +kk++W++vsk m+e+g+ +sp+qC++k+++lnkryk+++++ +k+ +++++++ ++ XP_027353308.1 110 KWTDTMVRLLIMAVYYIGDEAGSEGtdpagkkkatgllQKKGKWKSVSKGMMEKGYYVSPQQCEDKFNDLNKRYKRVNDILGKGtACRVVENQSL 204 7************99998886433667778899999******************************************559****** PP trihelix 82 fdqle 86 +d ++ XP_027353308.1 205 LDTMD 209 *9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MEPNALGGGI FSNISSGLVG VENPLQQQQQ PNLQNQQNPH PLHHPQMVSY ATHHDTDAHQ 60 QSIKHGYNYS ATKTNKPQST LSDEDEPVFT ADDNSSGDPK RKVSPWHRMK WTDTMVRLLI 120 MAVYYIGDEA GSEGTDPAGK KKATGLLQKK GKWKSVSKGM MEKGYYVSPQ QCEDKFNDLN 180 KRYKRVNDIL GKGTACRVVE NQSLLDTMDL SPKMKEEVRK LLNSKHLFFR EMCAYHNSCG 240 HGSNNNNNGA SNVQQSAEAG TESQPQHHHH PQQQLHQQQR CFHSSENGVG SLRMLRENDD 300 EEEDDDSEDY SDEEEEESAE GGSRGTQVED DENDGMRKRP KKGGFGVSSS QVMQQLSSEA 360 NGVLQDGGKS RWEKKQWMKK RVVQLEEQQV DYQVQAFELE KQRLKWTRFS SKKEREMERD 420 KLENERKRLE IERMVLLLRH KELELLNIQQ QKQQHQQQHS ST

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MEPNALGGGI FSNISSGLVG VENPLQQQQQ PNLQNQQNPH PLHHPQMVSY ATHHDTDAHQ  60
QSIKHGYNYS ATKTNKPQST LSDEDEPVFT ADDNSSGDPK RKVSPWHRMK WTDTMVRLLI  120
MAVYYIGDEA GSEGTDPAGK KKATGLLQKK GKWKSVSKGM MEKGYYVSPQ QCEDKFNDLN  180
KRYKRVNDIL GKGTACRVVE NQSLLDTMDL SPKMKEEVRK LLNSKHLFFR EMCAYHNSCG  240
HGSNNNNNGA SNVQQSAEAG TESQPQHHHH PQQQLHQQQR CFHSSENGVG SLRMLRENDD  300
EEEDDDSEDY SDEEEEESAE GGSRGTQVED DENDGMRKRP KKGGFGVSSS QVMQQLSSEA  360
NGVLQDGGKS RWEKKQWMKK RVVQLEEQQV DYQVQAFELE KQRLKWTRFS SKKEREMERD  420
KLENERKRLE IERMVLLLRH KELELLNIQQ QKQQHQQQHS ST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	7e-65	Trihelix family protein