PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027353335.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MIKC_MADS

Protein Properties

Length: 233aa MW: 26410.2 Da PI: 9.4754

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027353335.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	89.1	2.3e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ienk+ +qvtfskRr+g+lKKA+E+SvLCda+va+i+fs++gkl+eyss XP_027353335.1 9 KPIENKTSQQVTFSKRRTGLLKKANEISVLCDAQVALIMFSTKGKLFEYSS 59 78***********************************************96 PP
2	K-box	79.6	7.5e-27	81	162	9	90
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqee 90 ++++ + +++ e+ kL +++e ++r+ R++lG+dL++L+lkeLq+LeqqL++slk+iR++Kn+++ ++i+el k++ke ++ XP_027353335.1 81 ANNEPQGNWSFEYIKLTAKVEVIERNVRNFLGNDLDPLTLKELQSLEQQLDTSLKRIRTRKNQVMNQSISELHKRMKEKVKT 162 45556789*****************************************************************999986655 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MGRGRVQLKP IENKTSQQVT FSKRRTGLLK KANEISVLCD AQVALIMFST KGKLFEYSSE 60 RSMEDILERY ERHTHTELGE ANNEPQGNWS FEYIKLTAKV EVIERNVRNF LGNDLDPLTL 120 KELQSLEQQL DTSLKRIRTR KNQVMNQSIS ELHKRMKEKV KTQTERPHSC PETLGQSAAT 180 LNLSSPELLP SQRLVPSLTL SGTLQGRVSL EETGEAQTAP SGNAIIPPWM LHI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60910.1	6e-72	MIKC_MADS family protein