PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027353383.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HD-ZIP

Protein Properties

Length: 212aa MW: 25104.5 Da PI: 8.1951

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027353383.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.6	1e-18	56	110	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ ++t++q+e Le+ F+++ +++ e++ +L+++lgL+ rq+ vWFqNrR+++k XP_027353383.1 56 EKKKRLTSNQIELLERSFQEEIKLDPERKMKLSRELGLQPRQIAVWFQNRRTRWK 110 57788*************************************************9 PP
2	HD-ZIP_I/II	116.4	1.7e-37	56	147	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekk+rl+++q++lLE+sF+ee kL+perK++l+reLglqprq+avWFqnrR R+k+kqlE+ y++Lk+++d +++e+++L++ev +L++ l+ XP_027353383.1 56 EKKKRLTSNQIELLERSFQEEIKLDPERKMKLSRELGLQPRQIAVWFQNRRTRWKAKQLEHLYDVLKHQFDIISKEKQKLQEEVMKLKAILR 147 69*************************************************************************************98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MDWHESTRPF VPRPESSLSF FYNYNNHPYP EVEMKQATLT ETTQRLVPAM ENGNKEKKKR 60 LTSNQIELLE RSFQEEIKLD PERKMKLSRE LGLQPRQIAV WFQNRRTRWK AKQLEHLYDV 120 LKHQFDIISK EKQKLQEEVM KLKAILREQG FKTQTLMGYT EISGEETVES TSEALRGSTS 180 NKFAEGYCSF TVDDYNTVSL PHCQWPAMPY YP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	57	86	KKKRLTSNQIELLERSFQEEIKLDPERKMK
2	105	113	RRTRWKAKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	3e-51	HD-ZIP family protein