PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027353384.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 815aa MW: 91778 Da PI: 6.7237

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027353384.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	118.9	2.5e-37	105	179	2	76
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 Cqv+gCe+d+se+k yhrrh+vC ++++a++vl++g+ +r+CqqC++fh ls+fDe+krsCrr+L++hn rrr+k XP_027353384.1 105 CQVPGCEVDISELKGYHRRHRVCLHCANASTVLLHGEAKRYCQQCGKFHVLSDFDEGKRSCRRKLERHNTRRRRK 179 ************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 815 aa Download sequence
MEPQSFTPPP HMESEDPSSI WDLSYLLDFN LDDDNSLPLN DLQPPHLQTP ANDKVRKRDP 60 RLTCSNFLAG RVPCACPELD AKLEDDGLPG KKRPRTARAS TSASCQVPGC EVDISELKGY 120 HRRHRVCLHC ANASTVLLHG EAKRYCQQCG KFHVLSDFDE GKRSCRRKLE RHNTRRRRKP 180 PPSDSTAAAD HDLQPVNQNE DCNYDGDAGK DCSNLSSEIN EKEASPYQED ELVPIPSSAP 240 DTQNINSDSV VSLTASGETR VNSGKDVSNT SNSPSYCDNK SAYSSMCQTG RISFKLYDWN 300 PAEFPRRLRH QIFQWLANMP LELEGYIRPG CTILTIFIAM PNIMWINEFH TSTKKQENLF 360 PLSFQVCIEF DLLIFIFFVF LISFFFLLWI NQLLKDSLEY ARDLVAPGKM LYGRGTALIH 420 LNDMIFRVMK DGTSVTKVEV NMQAPRLHYV HPTYFEAGKP MEFVACGSNL LQPKFRFLVS 480 FSGKYLKCQH CVPSPHNWTE DNISCAFDSQ LYKIYVPHTE ESLFGPAFIE VENESGLSNF 540 IPVLIGDKEI CTEMKTLQQK LDISLLSRQF QSASGGSICS SCEDFALRHA SSSDLLVDIA 600 WLLKDPTSET FDRLMTASQI HRYCHLLDFL MCNDSSVILG KILPNLIFLT ESMKSNIVIN 660 RMGDVDMTPL LKCIHNARDA IYQNHLKGGD IGVHSEMEAF KLAQGCSKND MLSVVAVTTQ 720 DVLSRADARL GILKSPTSNE KNERIPLLKR EIIMNVEELP VRCGRRNLAR GFLTSRPAVF 780 VIVSVAVCLG VCVAVLHHGR VSELAVSIRR CLFNY

Sequence ? help Back to Top

Protein Sequence Length: 815 aa Download sequence

MEPQSFTPPP HMESEDPSSI WDLSYLLDFN LDDDNSLPLN DLQPPHLQTP ANDKVRKRDP  60
RLTCSNFLAG RVPCACPELD AKLEDDGLPG KKRPRTARAS TSASCQVPGC EVDISELKGY  120
HRRHRVCLHC ANASTVLLHG EAKRYCQQCG KFHVLSDFDE GKRSCRRKLE RHNTRRRRKP  180
PPSDSTAAAD HDLQPVNQNE DCNYDGDAGK DCSNLSSEIN EKEASPYQED ELVPIPSSAP  240
DTQNINSDSV VSLTASGETR VNSGKDVSNT SNSPSYCDNK SAYSSMCQTG RISFKLYDWN  300
PAEFPRRLRH QIFQWLANMP LELEGYIRPG CTILTIFIAM PNIMWINEFH TSTKKQENLF  360
PLSFQVCIEF DLLIFIFFVF LISFFFLLWI NQLLKDSLEY ARDLVAPGKM LYGRGTALIH  420
LNDMIFRVMK DGTSVTKVEV NMQAPRLHYV HPTYFEAGKP MEFVACGSNL LQPKFRFLVS  480
FSGKYLKCQH CVPSPHNWTE DNISCAFDSQ LYKIYVPHTE ESLFGPAFIE VENESGLSNF  540
IPVLIGDKEI CTEMKTLQQK LDISLLSRQF QSASGGSICS SCEDFALRHA SSSDLLVDIA  600
WLLKDPTSET FDRLMTASQI HRYCHLLDFL MCNDSSVILG KILPNLIFLT ESMKSNIVIN  660
RMGDVDMTPL LKCIHNARDA IYQNHLKGGD IGVHSEMEAF KLAQGCSKND MLSVVAVTTQ  720
DVLSRADARL GILKSPTSNE KNERIPLLKR EIIMNVEELP VRCGRRNLAR GFLTSRPAVF  780
VIVSVAVCLG VCVAVLHHGR VSELAVSIRR CLFNY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	166	178	RRKLERHNTRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.3	0.0	SBP family protein