PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027353393.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 770aa MW: 86244.4 Da PI: 6.8392

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027353393.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	119	2.4e-37	105	179	2	76
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 Cqv+gCe+d+se+k yhrrh+vC ++++a++vl++g+ +r+CqqC++fh ls+fDe+krsCrr+L++hn rrr+k XP_027353393.1 105 CQVPGCEVDISELKGYHRRHRVCLHCANASTVLLHGEAKRYCQQCGKFHVLSDFDEGKRSCRRKLERHNTRRRRK 179 ************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 770 aa Download sequence
MEPQSFTPPP HMESEDPSSI WDLSYLLDFN LDDDNSLPLN DLQPPHLQTP ANDKVRKRDP 60 RLTCSNFLAG RVPCACPELD AKLEDDGLPG KKRPRTARAS TSASCQVPGC EVDISELKGY 120 HRRHRVCLHC ANASTVLLHG EAKRYCQQCG KFHVLSDFDE GKRSCRRKLE RHNTRRRRKP 180 PPSDSTAAAD HDLQPVNQNE DCNYDGDAGK DCSNLSSEIN EKEASPYQED ELVPIPSSAP 240 DTQNINSDSV VSLTASGETR VNSGKDVSNT SNSPSYCDNK SAYSSMCQTG RISFKLYDWN 300 PAEFPRRLRH QIFQWLANMP LELEGYIRPG CTILTIFIAM PNIMWINLLK DSLEYARDLV 360 APGKMLYGRG TALIHLNDMI FRVMKDGTSV TKVEVNMQAP RLHYVHPTYF EAGKPMEFVA 420 CGSNLLQPKF RFLVSFSGKY LKCQHCVPSP HNWTEDNISC AFDSQLYKIY VPHTEESLFG 480 PAFIEVENES GLSNFIPVLI GDKEICTEMK TLQQKLDISL LSRQFQSASG GSICSSCEDF 540 ALRHASSSDL LVDIAWLLKD PTSETFDRLM TASQIHRYCH LLDFLMCNDS SVILGKILPN 600 LIFLTESMKS NIVINRMGDV DMTPLLKCIH NARDAIYQNH LKGGDIGVHS EMEAFKLAQG 660 CSKNDMLSVV AVTTQDVLSR ADARLGILKS PTSNEKNERI PLLKREIIMN VEELPVRCGR 720 RNLARGFLTS RPAVFVIVSV AVCLGVCVAV LHHGRVSELA VSIRRCLFNY

Sequence ? help Back to Top

Protein Sequence Length: 770 aa Download sequence

MEPQSFTPPP HMESEDPSSI WDLSYLLDFN LDDDNSLPLN DLQPPHLQTP ANDKVRKRDP  60
RLTCSNFLAG RVPCACPELD AKLEDDGLPG KKRPRTARAS TSASCQVPGC EVDISELKGY  120
HRRHRVCLHC ANASTVLLHG EAKRYCQQCG KFHVLSDFDE GKRSCRRKLE RHNTRRRRKP  180
PPSDSTAAAD HDLQPVNQNE DCNYDGDAGK DCSNLSSEIN EKEASPYQED ELVPIPSSAP  240
DTQNINSDSV VSLTASGETR VNSGKDVSNT SNSPSYCDNK SAYSSMCQTG RISFKLYDWN  300
PAEFPRRLRH QIFQWLANMP LELEGYIRPG CTILTIFIAM PNIMWINLLK DSLEYARDLV  360
APGKMLYGRG TALIHLNDMI FRVMKDGTSV TKVEVNMQAP RLHYVHPTYF EAGKPMEFVA  420
CGSNLLQPKF RFLVSFSGKY LKCQHCVPSP HNWTEDNISC AFDSQLYKIY VPHTEESLFG  480
PAFIEVENES GLSNFIPVLI GDKEICTEMK TLQQKLDISL LSRQFQSASG GSICSSCEDF  540
ALRHASSSDL LVDIAWLLKD PTSETFDRLM TASQIHRYCH LLDFLMCNDS SVILGKILPN  600
LIFLTESMKS NIVINRMGDV DMTPLLKCIH NARDAIYQNH LKGGDIGVHS EMEAFKLAQG  660
CSKNDMLSVV AVTTQDVLSR ADARLGILKS PTSNEKNERI PLLKREIIMN VEELPVRCGR  720
RNLARGFLTS RPAVFVIVSV AVCLGVCVAV LHHGRVSELA VSIRRCLFNY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	166	178	RRKLERHNTRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.1	0.0	SBP family protein