PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027353461.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 511aa MW: 55751.7 Da PI: 9.2061

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027353461.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.1e-05	65	87	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H XP_027353461.1 65 FICEICNKGFQRDQNLQLHRRGH 87 89*******************88 PP
2	zf-C2H2	13.9	0.00016	141	163	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ XP_027353461.1 141 WKCEKCSKKYAVQSDWKAHTKTC 163 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MQTMPDDPFS LSTSIVGIAI EQNTNPNPNP LPAATKKKRN LPGTPDPDAE VIALSPKTLM 60 ATNRFICEIC NKGFQRDQNL QLHRRGHNLP WKLRQRSNKE VRKKVYICPE KTCVHHDAAR 120 ALGDLTGIKK HYSRKHGEKK WKCEKCSKKY AVQSDWKAHT KTCGTREYKC DCGTLFSRKD 180 SFITHRAFCD ALAEESARLT SVTTTNINFK NEDGTVMNAQ HGLSSRGLIT GLGMQNVPQF 240 GPHGFRIMGM SAGQQRPNLS LWLNQGNPQP LDVSLSSSCS SGFPDVVQMA QANNALVGSS 300 SIFSNFGMHA SNSSNPNLSL SPLTKKGEGG ALDLASMYSE SQSNTSNSTS PMSATALLQK 360 AAQMGSTRSS TNPSIFSSSF GVMSSSSTQT TSLNSNAKQS CDELNQAFQN MKQHENNFNA 420 ISNATMLGSC TNFNSLTHSS NGLDQFLMQT TNVEPSEAMK LKLHHGSNIV EHNLTRDFLG 480 MDVGGHAFLP QELAKFASLG SSMGLNQFTH Q

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MQTMPDDPFS LSTSIVGIAI EQNTNPNPNP LPAATKKKRN LPGTPDPDAE VIALSPKTLM  60
ATNRFICEIC NKGFQRDQNL QLHRRGHNLP WKLRQRSNKE VRKKVYICPE KTCVHHDAAR  120
ALGDLTGIKK HYSRKHGEKK WKCEKCSKKY AVQSDWKAHT KTCGTREYKC DCGTLFSRKD  180
SFITHRAFCD ALAEESARLT SVTTTNINFK NEDGTVMNAQ HGLSSRGLIT GLGMQNVPQF  240
GPHGFRIMGM SAGQQRPNLS LWLNQGNPQP LDVSLSSSCS SGFPDVVQMA QANNALVGSS  300
SIFSNFGMHA SNSSNPNLSL SPLTKKGEGG ALDLASMYSE SQSNTSNSTS PMSATALLQK  360
AAQMGSTRSS TNPSIFSSSF GVMSSSSTQT TSLNSNAKQS CDELNQAFQN MKQHENNFNA  420
ISNATMLGSC TNFNSLTHSS NGLDQFLMQT TNVEPSEAMK LKLHHGSNIV EHNLTRDFLG  480
MDVGGHAFLP QELAKFASLG SSMGLNQFTH Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	92	104	KLRQRSNKEVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03150.1	1e-108	C2H2 family protein