PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027353529.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 1006aa MW: 111129 Da PI: 6.0974

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027353529.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.7	2.5e-41	148	225	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C +dls+ak+yhrrhkvCe+hska+++lv + +qrfCqqCsrfh+l+efDe+krsCrrrLa+hn+rrrk+++ XP_027353529.1 148 ICQVEDCGTDLSNAKDYHRRHKVCEMHSKASKALVGNAMQRFCQQCSRFHMLQEFDEGKRSCRRRLAGHNKRRRKTNQ 225 5**************************************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1006 aa Download sequence
MEARFGAEAF HLYGSSDLRG VGKRTVEWDL NEWKWDGDLF VARPLSPVPE HRQFFPVPGG 60 SSNSNSSSSC SDDVDLGIRR GNKEGERKRR VVVVEDETGL NEEAGSLSLK IGGGRGVGGS 120 TVATQIASWE GTNGKKSRVA GGTSNRAICQ VEDCGTDLSN AKDYHRRHKV CEMHSKASKA 180 LVGNAMQRFC QQCSRFHMLQ EFDEGKRSCR RRLAGHNKRR RKTNQGAVPS GSSLNDDQTS 240 SYLLISLLKI LSNMHSDRSD QNTDQDLLTH LLKSLASQNG EQGSKNLSKL LREPENLLKE 300 GRSSGKSEVV STLFSNGSQG SPTTTKQNQS VSISEIQHQV MHAHDARAAD QQTVSSTKPS 360 VSNSPPAYSE ARDSTAGQTK MNNFDLNDIY VDSDDGIEDI ERLPVSGNLG TTSSLDYPWM 420 QQDSHQSSPP QTSGNSDSAS AQSPSSSSGE AQSRTDRIVF KLFGKEPNDF PLVLRAQILD 480 WLSHSPTDIE GYIRPGCIVL TIYLRQAEAV WEELCYDLAS SLNRLLDVSD DDFWRTGWVH 540 IRVQHQIAFI FNGQVVIDAS LPSRSNYSKI LSVSPIAVPA SKTAQFSVKG INLIRPATRL 600 LCAIEGSYLV CEDACESMDQ CSKDLDELEC IQFSCSVPVM NGRGFIEIED QGLSSSFFPF 660 IVVEEDVCSE ICVLEPLLEL SDTDPDIEGD GRIKARNQAM DFIHEMGWLL HRSQMKSRMV 720 HLNSGADLFP LNRFKWLMEF SVDHDWCAVV KKLLNLLFDG TVSTGDHPSL YLALSELGVL 780 HRAVRRNSRQ LVELLLRFVP ENISDKLGAE DTVLVDEENQ SFLFTPDVIG PAGLTPLHIA 840 AGKDGSEDVL DALTNDPCMV GIEAWKSARD STGSTPEDYA RLRGHYTYIH LVQKKINKKQ 900 GGTHVVVEIP SNLTGFSTNQ KQNESSTSFE IGKTDVKYVQ KHCKLCDHKL SCRTAVGKSL 960 VYKPAMLSMV AIAAVCVCVA LLFKSSPEVL YVFRPFRWES LEFGTS

Sequence ? help Back to Top

Protein Sequence Length: 1006 aa Download sequence

MEARFGAEAF HLYGSSDLRG VGKRTVEWDL NEWKWDGDLF VARPLSPVPE HRQFFPVPGG  60
SSNSNSSSSC SDDVDLGIRR GNKEGERKRR VVVVEDETGL NEEAGSLSLK IGGGRGVGGS  120
TVATQIASWE GTNGKKSRVA GGTSNRAICQ VEDCGTDLSN AKDYHRRHKV CEMHSKASKA  180
LVGNAMQRFC QQCSRFHMLQ EFDEGKRSCR RRLAGHNKRR RKTNQGAVPS GSSLNDDQTS  240
SYLLISLLKI LSNMHSDRSD QNTDQDLLTH LLKSLASQNG EQGSKNLSKL LREPENLLKE  300
GRSSGKSEVV STLFSNGSQG SPTTTKQNQS VSISEIQHQV MHAHDARAAD QQTVSSTKPS  360
VSNSPPAYSE ARDSTAGQTK MNNFDLNDIY VDSDDGIEDI ERLPVSGNLG TTSSLDYPWM  420
QQDSHQSSPP QTSGNSDSAS AQSPSSSSGE AQSRTDRIVF KLFGKEPNDF PLVLRAQILD  480
WLSHSPTDIE GYIRPGCIVL TIYLRQAEAV WEELCYDLAS SLNRLLDVSD DDFWRTGWVH  540
IRVQHQIAFI FNGQVVIDAS LPSRSNYSKI LSVSPIAVPA SKTAQFSVKG INLIRPATRL  600
LCAIEGSYLV CEDACESMDQ CSKDLDELEC IQFSCSVPVM NGRGFIEIED QGLSSSFFPF  660
IVVEEDVCSE ICVLEPLLEL SDTDPDIEGD GRIKARNQAM DFIHEMGWLL HRSQMKSRMV  720
HLNSGADLFP LNRFKWLMEF SVDHDWCAVV KKLLNLLFDG TVSTGDHPSL YLALSELGVL  780
HRAVRRNSRQ LVELLLRFVP ENISDKLGAE DTVLVDEENQ SFLFTPDVIG PAGLTPLHIA  840
AGKDGSEDVL DALTNDPCMV GIEAWKSARD STGSTPEDYA RLRGHYTYIH LVQKKINKKQ  900
GGTHVVVEIP SNLTGFSTNQ KQNESSTSFE IGKTDVKYVQ KHCKLCDHKL SCRTAVGKSL  960
VYKPAMLSMV AIAAVCVCVA LLFKSSPEVL YVFRPFRWES LEFGTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60030.1	0.0	SBP family protein