PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027353532.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 994aa MW: 109745 Da PI: 6.0498

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027353532.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.7	2.4e-41	148	225	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C +dls+ak+yhrrhkvCe+hska+++lv + +qrfCqqCsrfh+l+efDe+krsCrrrLa+hn+rrrk+++ XP_027353532.1 148 ICQVEDCGTDLSNAKDYHRRHKVCEMHSKASKALVGNAMQRFCQQCSRFHMLQEFDEGKRSCRRRLAGHNKRRRKTNQ 225 5**************************************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 994 aa Download sequence
MEARFGAEAF HLYGSSDLRG VGKRTVEWDL NEWKWDGDLF VARPLSPVPE HRQFFPVPGG 60 SSNSNSSSSC SDDVDLGIRR GNKEGERKRR VVVVEDETGL NEEAGSLSLK IGGGRGVGGS 120 TVATQIASWE GTNGKKSRVA GGTSNRAICQ VEDCGTDLSN AKDYHRRHKV CEMHSKASKA 180 LVGNAMQRFC QQCSRFHMLQ EFDEGKRSCR RRLAGHNKRR RKTNQGAVPS GSSLNDDQTS 240 SYLLISLLKI LSNMHSDRSD QNTDQDLLTH LLKSLASQNG EQGSKNLSKL LREPENLLKE 300 GRSSGKSEVV STLFSNGSQG SPTTTKQNQS VSISEIQHQV MHAHDARAAD QQTVSSTKPS 360 VSNSPPAYSE ARDSTAGQTK MNNFDLNDIY VDSDDGIEDI ERLPVSGNLG TTSSLDYPWM 420 QQDSHQSSPP QTSGNSDSAS AQSPSSSSGE AQSRTDRIVF KLFGKEPNDF PLVLRAQILD 480 WLSHSPTDIE GYIRPGCIVL TIYLRQAEAV WEELCYDLAS SLNRLLDVSD DDFWRTGWVH 540 IRVVIDASLP SRSNYSKILS VSPIAVPASK TAQFSVKGIN LIRPATRLLC AIEGSYLVCE 600 DACESMDQCS KDLDELECIQ FSCSVPVMNG RGFIEIEDQG LSSSFFPFIV VEEDVCSEIC 660 VLEPLLELSD TDPDIEGDGR IKARNQAMDF IHEMGWLLHR SQMKSRMVHL NSGADLFPLN 720 RFKWLMEFSV DHDWCAVVKK LLNLLFDGTV STGDHPSLYL ALSELGVLHR AVRRNSRQLV 780 ELLLRFVPEN ISDKLGAEDT VLVDEENQSF LFTPDVIGPA GLTPLHIAAG KDGSEDVLDA 840 LTNDPCMVGI EAWKSARDST GSTPEDYARL RGHYTYIHLV QKKINKKQGG THVVVEIPSN 900 LTGFSTNQKQ NESSTSFEIG KTDVKYVQKH CKLCDHKLSC RTAVGKSLVY KPAMLSMVAI 960 AAVCVCVALL FKSSPEVLYV FRPFRWESLE FGTS

Sequence ? help Back to Top

Protein Sequence Length: 994 aa Download sequence

MEARFGAEAF HLYGSSDLRG VGKRTVEWDL NEWKWDGDLF VARPLSPVPE HRQFFPVPGG  60
SSNSNSSSSC SDDVDLGIRR GNKEGERKRR VVVVEDETGL NEEAGSLSLK IGGGRGVGGS  120
TVATQIASWE GTNGKKSRVA GGTSNRAICQ VEDCGTDLSN AKDYHRRHKV CEMHSKASKA  180
LVGNAMQRFC QQCSRFHMLQ EFDEGKRSCR RRLAGHNKRR RKTNQGAVPS GSSLNDDQTS  240
SYLLISLLKI LSNMHSDRSD QNTDQDLLTH LLKSLASQNG EQGSKNLSKL LREPENLLKE  300
GRSSGKSEVV STLFSNGSQG SPTTTKQNQS VSISEIQHQV MHAHDARAAD QQTVSSTKPS  360
VSNSPPAYSE ARDSTAGQTK MNNFDLNDIY VDSDDGIEDI ERLPVSGNLG TTSSLDYPWM  420
QQDSHQSSPP QTSGNSDSAS AQSPSSSSGE AQSRTDRIVF KLFGKEPNDF PLVLRAQILD  480
WLSHSPTDIE GYIRPGCIVL TIYLRQAEAV WEELCYDLAS SLNRLLDVSD DDFWRTGWVH  540
IRVVIDASLP SRSNYSKILS VSPIAVPASK TAQFSVKGIN LIRPATRLLC AIEGSYLVCE  600
DACESMDQCS KDLDELECIQ FSCSVPVMNG RGFIEIEDQG LSSSFFPFIV VEEDVCSEIC  660
VLEPLLELSD TDPDIEGDGR IKARNQAMDF IHEMGWLLHR SQMKSRMVHL NSGADLFPLN  720
RFKWLMEFSV DHDWCAVVKK LLNLLFDGTV STGDHPSLYL ALSELGVLHR AVRRNSRQLV  780
ELLLRFVPEN ISDKLGAEDT VLVDEENQSF LFTPDVIGPA GLTPLHIAAG KDGSEDVLDA  840
LTNDPCMVGI EAWKSARDST GSTPEDYARL RGHYTYIHLV QKKINKKQGG THVVVEIPSN  900
LTGFSTNQKQ NESSTSFEIG KTDVKYVQKH CKLCDHKLSC RTAVGKSLVY KPAMLSMVAI  960
AAVCVCVALL FKSSPEVLYV FRPFRWESLE FGTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60030.1	0.0	SBP family protein