PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027353909.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 527aa MW: 59108.7 Da PI: 7.274

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027353909.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.3	4.7e-10	473	521	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 ++W+ E++ l av ++G+g+Wk+I + + Rt+ ++k++w++ XP_027353909.1 473 KKWSVLEEQTLRTAVDKFGKGNWKLILNSHKdifEDRTEVDLKDKWRNM 521 68*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 527 aa Download sequence
MDSEEDGGCW VLEFLLGNPL VESNLIKKVL WKITVPNADS RLKKTILLKT LQHYLSTVSI 60 AESILQTLEI LEELLRLEGS PITAAMSAAY CAVAVECTLK YLQLELNDNP AYHGAVERIW 120 RGRVRWMDPS MNASREGSLL FSAELKRWRN DIEASLLDSR LRERLASSRT RRNAVRKLKV 180 YLAEAMQNLG PSFLEVAASM PANNGRIDAV ESMRAEDDGI DAETRRACSG THELTHPKRV 240 EIQRDNKLFE AKGTSVAAEE AGPSTSRCKN DSVPKGACVA THVNHELTHQ ERVAVSPVEI 300 LKDNKLSEAK DTGTGAEEVS PSTTCSKVDS ATNCEVQKAG ESHEVEDPIL NSLHMSGNAR 360 AELAKKDMNQ EPPIENQSRD ADVSFPRTGQ RINNNDDNLN EGTSVPQKGD QRPSLMEKNN 420 TACTYEWNDA IDGLQGGTSN PESRFHFPSP KRRKLSPLKK YEPANITRRR KPKKWSVLEE 480 QTLRTAVDKF GKGNWKLILN SHKDIFEDRT EVDLKDKWRN MMRYGCK

Sequence ? help Back to Top

Protein Sequence Length: 527 aa Download sequence

MDSEEDGGCW VLEFLLGNPL VESNLIKKVL WKITVPNADS RLKKTILLKT LQHYLSTVSI  60
AESILQTLEI LEELLRLEGS PITAAMSAAY CAVAVECTLK YLQLELNDNP AYHGAVERIW  120
RGRVRWMDPS MNASREGSLL FSAELKRWRN DIEASLLDSR LRERLASSRT RRNAVRKLKV  180
YLAEAMQNLG PSFLEVAASM PANNGRIDAV ESMRAEDDGI DAETRRACSG THELTHPKRV  240
EIQRDNKLFE AKGTSVAAEE AGPSTSRCKN DSVPKGACVA THVNHELTHQ ERVAVSPVEI  300
LKDNKLSEAK DTGTGAEEVS PSTTCSKVDS ATNCEVQKAG ESHEVEDPIL NSLHMSGNAR  360
AELAKKDMNQ EPPIENQSRD ADVSFPRTGQ RINNNDDNLN EGTSVPQKGD QRPSLMEKNN  420
TACTYEWNDA IDGLQGGTSN PESRFHFPSP KRRKLSPLKK YEPANITRRR KPKKWSVLEE  480
QTLRTAVDKF GKGNWKLILN SHKDIFEDRT EVDLKDKWRN MMRYGCK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	451	471	KRRKLSPLKKYEPANITRRRK
2	451	474	KRRKLSPLKKYEPANITRRRKPKK
3	452	472	KRRKLSPLKKYEPANITRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	3e-13	MYB_related family protein