PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027354262.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family BBR-BPC
Protein Properties Length: 343aa    MW: 37956.4 Da    PI: 10.0999
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027354262.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind397.91.4e-1213634318301
       GAGA_bind  18 aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla....salpvgvqvlsgtksi 108
                     +s+k     q+m+++aerda+i+ernlalsekkaa+aerd+aflqrd+a+aern+a++erdn++++l+++ensl+     ++p+g+q+++g+k+i
  XP_027354262.1  36 PSMK-----QIMTTMAERDAAIQERNLALSEKKAALAERDVAFLQRDAAIAERNNAIMERDNAIATLQYRENSLTsgsmPSCPPGCQISRGVKHI 125
                     4555.....****************************************************************99888889************** PP

       GAGA_bind 109 dslqq.lse.pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesader............... 186
                     ++ qq +++ p+++d ++ +re+++++alp    ++ea ++      +rak+pke+k+++++kk++k  kkvkkes+d +               
  XP_027354262.1 126 HHPQQqVHHlPNIGDASYSAREMHTTDALPAAPIPTEAGKS------RRAKRPKEPKSTSPNKKTSKAAKKVKKESEDLNkvmfgkahewksgqe 214
                     ***9955669*******************955544444333......467799999999999999999999999999955599************ PP

       GAGA_bind 187 ..............skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkk 267
                                   ska++k +dl+ln+v++Dest+P+PvCsCtG+lrqCYkWGnGGWqSaCCttt+S+yPLP+++++r+aR++grKmS++af+k
  XP_027354262.1 215 mvnggddlnkqlavSKADWKGQDLGLNQVAYDESTMPPPVCSCTGVLRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFNK 309
                     *********************************************************************************************** PP

       GAGA_bind 268 lLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     lL++LaaeG+dlsnpvDLkdhWAkHGtn+++ti+
  XP_027354262.1 310 LLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 343
                     *********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MMPGIGKMEG TKQININLLR DSCHKFALQW LMQHQPSMKQ IMTTMAERDA AIQERNLALS  60
EKKAALAERD VAFLQRDAAI AERNNAIMER DNAIATLQYR ENSLTSGSMP SCPPGCQISR  120
GVKHIHHPQQ QVHHLPNIGD ASYSAREMHT TDALPAAPIP TEAGKSRRAK RPKEPKSTSP  180
NKKTSKAAKK VKKESEDLNK VMFGKAHEWK SGQEMVNGGD DLNKQLAVSK ADWKGQDLGL  240
NQVAYDESTM PPPVCSCTGV LRQCYKWGNG GWQSACCTTT LSMYPLPAVP NKRHARVGGR  300
KMSGSAFNKL LSRLAAEGHD LSNPVDLKDH WAKHGTNRYI TIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-134BBR-BPC family protein