PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027354367.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

E2F/DP

Protein Properties

Length: 342aa MW: 38005.5 Da PI: 6.4183

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027354367.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	87.3	1.1e-27	91	173	2	71
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 ++++Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg XP_027354367.1 91 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpsnsvsspdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 173 689******...*999***************************************************.*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MGKQPRQTVQ EEEEEEMPGR GTMVSGQSMS TSRSVGSPSS RSEQTMATPA SDNKFLRLNH 60 LDIHGDDAGS QGAVASKKKK RGQRAVGGDK SGRGLRQFSM KVCEKVESKG RTTYNEVADE 120 LVAEFADPSN SVSSPDQQQY DEKNIRRRVY DALNVLMAMD IISKDKKEIQ WKGLPRTSLS 180 DIEELKTERL ALRNRIEKKA AYLQELEEQY VGLQNLIQRN EQLYSSGNAP SGGVSLPFIL 240 VQTRPHATVE VEISEDMQLV HFDFNSTPFE LHDDTYVLKA MKFCERPQND NVTQNPTDGG 300 EGSSMSGLYH AQVPTSVSNP PVRPPSSPPL PGILKARVKN EH

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MGKQPRQTVQ EEEEEEMPGR GTMVSGQSMS TSRSVGSPSS RSEQTMATPA SDNKFLRLNH  60
LDIHGDDAGS QGAVASKKKK RGQRAVGGDK SGRGLRQFSM KVCEKVESKG RTTYNEVADE  120
LVAEFADPSN SVSSPDQQQY DEKNIRRRVY DALNVLMAMD IISKDKKEIQ WKGLPRTSLS  180
DIEELKTERL ALRNRIEKKA AYLQELEEQY VGLQNLIQRN EQLYSSGNAP SGGVSLPFIL  240
VQTRPHATVE VEISEDMQLV HFDFNSTPFE LHDDTYVLKA MKFCERPQND NVTQNPTDGG  300
EGSSMSGLYH AQVPTSVSNP PVRPPSSPPL PGILKARVKN EH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03415.1	1e-157	E2F/DP family protein