PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027354489.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 197aa MW: 21941.3 Da PI: 8.9667

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027354489.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	137.1	5.1e-43	76	152	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cq+e+C adl++ak+yhrrhkvCe+hskapvv+v+gl+qrfCqqCsrfh+l efDe+krsCrrrLa+hnerrrk+++ XP_027354489.1 76 CQAERCGADLTDAKRYHRRHKVCEFHSKAPVVVVAGLRQRFCQQCSRFHDLAEFDEAKRSCRRRLAGHNERRRKSNP 152 **************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MEAKSVERKR TLVEKVRKSN ITVEEEVENE VEEEDESGGG GDVNFIEEEK KKGVSGSGRR 60 GASGSGGGGG VSPPSCQAER CGADLTDAKR YHRRHKVCEF HSKAPVVVVA GLRQRFCQQC 120 SRFHDLAEFD EAKRSCRRRL AGHNERRRKS NPEATNEGCN KGHHQPKETT QCRLADERGR 180 IQMNLPGSSG YKSFNIR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53160.1	1e-42	SBP family protein