PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027354520.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

DBB

Protein Properties

Length: 238aa MW: 26120.7 Da PI: 4.6408

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027354520.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.6	2.2e-07	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lC++C +e H H++ XP_027354520.1 4 QCDVCEKAPATVICCADEAALCAKCDVEVHAAnklaskHQR 44 6*****************************65667777765 PP
2	zf-B_box	28.3	3.7e-09	53	94	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + ++C+ +++k + +fC +++ l+C+dC + +H+ H XP_027354520.1 53 KLPRCDICQDKAAFIFCVEDRALFCKDCDEPIHSAgslsanH 94 789******************************656666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MRIQCDVCEK APATVICCAD EAALCAKCDV EVHAANKLAS KHQRLLLQCL SNKLPRCDIC 60 QDKAAFIFCV EDRALFCKDC DEPIHSAGSL SANHQRFLAT GIRVALGSNC TKGNEKSQVE 120 PSNPNAQEVP VKIPSQQVPN FSSSWAVDDL LELADIECPD KKQSLEFGEL EWLADVGLFG 180 EQIPQEAITA AEVPQLPVAH TSNVASHKAP KFFMSYKKPR IEVLDEDDDE HFTVPDLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.1	1e-102	DBB family protein