PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027354536.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 410aa MW: 45342.2 Da PI: 6.3539

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027354536.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.6	9.1e-13	344	389	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR +i +++ +L++l+P+ +k + a++L +AveYIk+Lq XP_027354536.1 344 SIAERVRRTKISERMRKLQDLVPNM----DKQTNTADMLDLAVEYIKDLQ 389 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MESDLQQHPP MFLDHQQQMN SGLTRYRSAP SSYFSSIIDR EFYEHVFNRP SSPETERMLT 60 RFVNSLGGGD VDADADAEDS VSLTQNLPPV QQQQVSVVKE EVNQQSQALT SINNEPVVLH 120 QLHQSNINSY GSSAPRNFYQ NTGRPPLPNQ MKTGCGTSSN LIRHGSSPAG LFSNINIESG 180 YAAVRGMGTM GAVNNTSEEV NFSTPTRLKN ASNYSSGLMS SRAEIVNKSN TQNNPENEGY 240 AESQGNDFIS GFPVGPWDES TIISDNMTGL KRYREDDVKP FSGLNAAENQ NETGGQPPAA 300 PLAHHLSLPN TTAEMAAIEK FLQLSDSVPC KIRAKRGCAT HPRSIAERVR RTKISERMRK 360 LQDLVPNMDK QTNTADMLDL AVEYIKDLQK QVQTLSDNRT KCTCSHKQQQ

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MESDLQQHPP MFLDHQQQMN SGLTRYRSAP SSYFSSIIDR EFYEHVFNRP SSPETERMLT  60
RFVNSLGGGD VDADADAEDS VSLTQNLPPV QQQQVSVVKE EVNQQSQALT SINNEPVVLH  120
QLHQSNINSY GSSAPRNFYQ NTGRPPLPNQ MKTGCGTSSN LIRHGSSPAG LFSNINIESG  180
YAAVRGMGTM GAVNNTSEEV NFSTPTRLKN ASNYSSGLMS SRAEIVNKSN TQNNPENEGY  240
AESQGNDFIS GFPVGPWDES TIISDNMTGL KRYREDDVKP FSGLNAAENQ NETGGQPPAA  300
PLAHHLSLPN TTAEMAAIEK FLQLSDSVPC KIRAKRGCAT HPRSIAERVR RTKISERMRK  360
LQDLVPNMDK QTNTADMLDL AVEYIKDLQK QVQTLSDNRT KCTCSHKQQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	5e-69	bHLH family protein