PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027354622.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TCP

Protein Properties

Length: 406aa MW: 43728 Da PI: 7.1698

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027354622.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	119.7	3.6e-37	36	140	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.sec...eaesssssasnsssg.... 88 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el+++++ ++ c ++++ ++ +++s+ XP_027354622.1 36 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELPAWNPaITCssaLQHQQINEIVHQKSPndsm 130 79**************************************************************5444424443233333333333444444555 PP TCP 89 .........k 89 + XP_027354622.1 131 iaptgtivaE 140 6666666551 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MGETHRHSIA STSSKLGMRG GGEIVEVQGG HIVRSTGRKD RHSKVCTAKG PRDRRVRLSA 60 HTAIQFYDVQ DRLGYDRPSK AVDWLIKKAK AAIDELAELP AWNPAITCSS ALQHQQINEI 120 VHQKSPNDSM IAPTGTIVAE RIVHQFPPPQ LGENDGNNNN SNKYNSASGF LPASLDSDNI 180 AETIKSFFPM EATTTSFQNY PPPPDLLSRT ASGGGATQQD LRLSLQSFQD PVLLHQQAQT 240 HHEPVLFSGT AAALGFDGGS GWSEQQHQHH SDEHRLHRSM NWNTNAADAA NSGHGGGFVF 300 NSPAPAFGHG QFLSQRGPLQ SSNTPSVRAW IDPSMATAAA VADHHHHHHH QNYLSSLIHQ 360 ASVSGGLGFS GTGGFSGFHI PARIQGEEEH GGVSDKPSSA SSDSRH

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MGETHRHSIA STSSKLGMRG GGEIVEVQGG HIVRSTGRKD RHSKVCTAKG PRDRRVRLSA  60
HTAIQFYDVQ DRLGYDRPSK AVDWLIKKAK AAIDELAELP AWNPAITCSS ALQHQQINEI  120
VHQKSPNDSM IAPTGTIVAE RIVHQFPPPQ LGENDGNNNN SNKYNSASGF LPASLDSDNI  180
AETIKSFFPM EATTTSFQNY PPPPDLLSRT ASGGGATQQD LRLSLQSFQD PVLLHQQAQT  240
HHEPVLFSGT AAALGFDGGS GWSEQQHQHH SDEHRLHRSM NWNTNAADAA NSGHGGGFVF  300
NSPAPAFGHG QFLSQRGPLQ SSNTPSVRAW IDPSMATAAA VADHHHHHHH QNYLSSLIHQ  360
ASVSGGLGFS GTGGFSGFHI PARIQGEEEH GGVSDKPSSA SSDSRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53230.1	8e-89	TCP family protein