PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027354765.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C2H2
Protein Properties Length: 236aa    MW: 25048 Da    PI: 8.2985
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027354765.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.80.0001789111123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ykC+ C+k Fs+   L  H  +H
  XP_027354765.1  89 YKCSVCNKAFSSYQALGGHKASH 111
                     9***********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MALEALKSPT TPTPSFTPFE EPNLSYLEAP WAKRKRSKRP RMDPPCTEEE YLALCLIMLA  60
RGGAGGVSTA KPALSDNESA PLPAANLSYK CSVCNKAFSS YQALGGHKAS HRKFAGAAED  120
HSTSSAVTTS SASNGGGRSH ECSICHKSFP TGQALGGHKR CHYEGGGGGS SAVTASEGVG  180
STHTGSHSHH REFDLNLPAF PDFSTRFFAD DEVSSPLPSK KPRLNLTIPK IEIPQY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.14e-53C2H2 family protein