PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027354888.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Protein Properties

Length: 879aa MW: 96745 Da PI: 7.3608

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027354888.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58	1.7e-18	336	435	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k+l+ sd+++ grlvlpkk+ae++ ++++e+ l++ d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++ + e++ XP_027354888.1 336 FQKTLSASDAGRIGRLVLPKKCAETYfpPISQPEGLPLKILDAKGKEWIFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRLE-PEGR 428 99************************555566778***********99899999999.*******************766.6776 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_027354888.1 429 LVMGFRK 435 7777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 879 aa Download sequence
MASASSSSSK LCFNSECKEL KPERPKKGWR LRSGDLAELC DRCGSAFEEG RFCEIFHSTA 60 SGWRSCETCR KRIHCGCIVS SHAFVLLDPG GVECFACARK NIILPSNLPW PQSFSLQNRL 120 SDRLRDLSAK SWSQLAGSGP VPWKQAPSLF NSASSSDLLP DVPSLVELSN SFDKIYGNER 180 LPASALEKKN EDLTGISVNW SVKLGSREMM LMNGMRSEDK SSSCLSMCQQ PPSLKEDSSP 240 QPFGMPVPYS SQNERNGQLG VTGNHPQQTP LPPGKQFNGT MHLAPDSSGE AQVRNGRPRA 300 DARGRNQLLP RYWPRCTDLE LQQISIDSNS VITPLFQKTL SASDAGRIGR LVLPKKCAET 360 YFPPISQPEG LPLKILDAKG KEWIFQFRFW PNNNSRMYVL EGVTPCIQSM QLQAGDTVTF 420 SRLEPEGRLV MGFRKASSAV PSDQDNETNK TGNGFSTHGE AELADPNSWS KVDKSGYIAK 480 EALGSKSLIS RKRKSSILGS KSKRLRIENE DLIELKITWQ EAQGLLRPPP SHVPSIVVIE 540 GFEFEEYEEA PVLGKPTIFT SDNVGEKVQW AQCEDCLKWR KLPASALLPS KWTCSYNSWD 600 PERSSCSAAQ ELTAEELENL LPPCNSAVSK KMKAAKQDPD NAEALEGLDT LANLAILGEG 660 EALPASAQAT TKHPRHRPGC SCIVCIQPPS GKGPKHKQSC TCNVCLTVKR RFRTLMLRRE 720 KKQSEREAET TRKKQQQQHP QPLPSSEILL DEDSLPCNTG DSSPNQNKEG NDGSDDDPNR 780 IKSSMSPFKG QIDLNIQPER EEELSPGSDS GGMMKLLHDA SEMYLKHPTV LNSGTGDSSG 840 SQSQQLEGAR EEKLSNGVAH GSSSHNADKE HTQSLSMNV

Sequence ? help Back to Top

Protein Sequence Length: 879 aa Download sequence

MASASSSSSK LCFNSECKEL KPERPKKGWR LRSGDLAELC DRCGSAFEEG RFCEIFHSTA  60
SGWRSCETCR KRIHCGCIVS SHAFVLLDPG GVECFACARK NIILPSNLPW PQSFSLQNRL  120
SDRLRDLSAK SWSQLAGSGP VPWKQAPSLF NSASSSDLLP DVPSLVELSN SFDKIYGNER  180
LPASALEKKN EDLTGISVNW SVKLGSREMM LMNGMRSEDK SSSCLSMCQQ PPSLKEDSSP  240
QPFGMPVPYS SQNERNGQLG VTGNHPQQTP LPPGKQFNGT MHLAPDSSGE AQVRNGRPRA  300
DARGRNQLLP RYWPRCTDLE LQQISIDSNS VITPLFQKTL SASDAGRIGR LVLPKKCAET  360
YFPPISQPEG LPLKILDAKG KEWIFQFRFW PNNNSRMYVL EGVTPCIQSM QLQAGDTVTF  420
SRLEPEGRLV MGFRKASSAV PSDQDNETNK TGNGFSTHGE AELADPNSWS KVDKSGYIAK  480
EALGSKSLIS RKRKSSILGS KSKRLRIENE DLIELKITWQ EAQGLLRPPP SHVPSIVVIE  540
GFEFEEYEEA PVLGKPTIFT SDNVGEKVQW AQCEDCLKWR KLPASALLPS KWTCSYNSWD  600
PERSSCSAAQ ELTAEELENL LPPCNSAVSK KMKAAKQDPD NAEALEGLDT LANLAILGEG  660
EALPASAQAT TKHPRHRPGC SCIVCIQPPS GKGPKHKQSC TCNVCLTVKR RFRTLMLRRE  720
KKQSEREAET TRKKQQQQHP QPLPSSEILL DEDSLPCNTG DSSPNQNKEG NDGSDDDPNR  780
IKSSMSPFKG QIDLNIQPER EEELSPGSDS GGMMKLLHDA SEMYLKHPTV LNSGTGDSSG  840
SQSQQLEGAR EEKLSNGVAH GSSSHNADKE HTQSLSMNV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	490	495	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-148	B3 family protein