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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_027355027.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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| Family | ERF | ||||||||
| Protein Properties | Length: 153aa MW: 17527.4 Da PI: 8.6956 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 55.9 | 1e-17 | 31 | 80 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+G+r +k +g+WvAeIr+p +kr r++lg++ t+ Aa+a++ a +l+g
XP_027355027.1 31 PYRGIRMRK-WGKWVAEIREP---NKRSRIWLGSYTTPVAAARAYDTAVFYLRG 80
59*****99.**********9...336*************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 153 aa Download sequence |
MEEERDCCST NSSITKRKHH QQQQQQHQDN PYRGIRMRKW GKWVAEIREP NKRSRIWLGS 60 YTTPVAAARA YDTAVFYLRG PSARLNFPDL LFQDDDVSTQ HGDMSADSIR KKATQVGARV 120 DALQTALQSS SHNPSTHVTS DKPDLNEYPK PED |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G46768.1 | 9e-53 | ERF family protein | ||||




