PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027355079.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HSF

Protein Properties

Length: 416aa MW: 46796.7 Da PI: 4.9135

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027355079.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.1	9.3e-36	93	184	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k++e++ed+++++++sws+ nsfvv+d+++f+++vLp+yFkh+nf+SFvRQLn+YgF+k++ ++ weF+++ F +g+k+ll++ XP_027355079.1 93 FLTKTFEVVEDPSTDSIVSWSRARNSFVVWDSHKFSTTVLPRYFKHNNFSSFVRQLNTYGFRKIDPDR---------WEFANEGFLAGQKHLLKT 178 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 ikr+++ XP_027355079.1 179 IKRRRN 184 *987 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MAEPSHILQK EVKYLSLSLE SSSPFPLNSL FAMPLLPSAN PLHFNENHTQ PKTEMKGVTV 60 KEEETAPFAT VSSSSNLSPQ PMEGLHEVGP PPFLTKTFEV VEDPSTDSIV SWSRARNSFV 120 VWDSHKFSTT VLPRYFKHNN FSSFVRQLNT YGFRKIDPDR WEFANEGFLA GQKHLLKTIK 180 RRRNVTQPQS VGGGGACIEL GEFGLEGEVE RLRRDRTVLM AEIVKLRQQQ NNSKEQVLTM 240 EARLQATEKK HQQMMTFLAK ALSNQSFVQQ LLQRNAQKRE LQGVRRKRRL AASPSVENLQ 300 LDQDPVIAAV PFEEQNGEEL AAIESQMESF FSCDEESSSE IKDPISGSVP IASGSDAIWE 360 DLLRQELVVG DPEDEVVIGD FSQIDAPVED LVARPDDWTE DLKNLVDHMG YVGSKP

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MAEPSHILQK EVKYLSLSLE SSSPFPLNSL FAMPLLPSAN PLHFNENHTQ PKTEMKGVTV  60
KEEETAPFAT VSSSSNLSPQ PMEGLHEVGP PPFLTKTFEV VEDPSTDSIV SWSRARNSFV  120
VWDSHKFSTT VLPRYFKHNN FSSFVRQLNT YGFRKIDPDR WEFANEGFLA GQKHLLKTIK  180
RRRNVTQPQS VGGGGACIEL GEFGLEGEVE RLRRDRTVLM AEIVKLRQQQ NNSKEQVLTM  240
EARLQATEKK HQQMMTFLAK ALSNQSFVQQ LLQRNAQKRE LQGVRRKRRL AASPSVENLQ  300
LDQDPVIAAV PFEEQNGEEL AAIESQMESF FSCDEESSSE IKDPISGSVP IASGSDAIWE  360
DLLRQELVVG DPEDEVVIGD FSQIDAPVED LVARPDDWTE DLKNLVDHMG YVGSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	176	182	LKTIKRR
2	211	216	RLRRDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-107	HSF family protein