PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027355309.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 186aa    MW: 21477.9 Da    PI: 6.3487
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027355309.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.52.7e-192175357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                    ++ ++t++q+ +Le++F++n+++  e++ +LA++lg++ r+V +W+qN+Ra++k+
  XP_027355309.1 21 NKKRLTEDQVAILENCFASNKKLEPEQKFQLANQLGVPPRKVAIWYQNKRARWKN 75
                    56789************************************************95 PP
2HD-ZIP_I/II108.83.8e-3521112293
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     +k+rl+++qv++LE++F +++kLepe+K +la++Lg+ pr+va+W+qn+RAR+k++ lE+d+ +L+++++++++e+e+Lek+ve+L+eelk+
  XP_027355309.1  21 NKKRLTEDQVAILENCFASNKKLEPEQKFQLANQLGVPPRKVAIWYQNKRARWKNQTLEVDHGVLQAKLENVMAEKEKLEKDVERLKEELKK 112
                     79***************************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MEDFIFSFKT QEHAHHRAKH NKKRLTEDQV AILENCFASN KKLEPEQKFQ LANQLGVPPR  60
KVAIWYQNKR ARWKNQTLEV DHGVLQAKLE NVMAEKEKLE KDVERLKEEL KKAQEMLLSS  120
NSNIKGGDHN NASCEFSTSF EEGGNSGVHD DATHEFWHNA EVMQDEELYA YFMGANYGSS  180
LHEKTA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53980.12e-37HD-ZIP family protein